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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
SDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKT
QLIQQVEQLKQEVSRLARERDAYKVKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4auw-a1-m1-cA 87 87 1.0000 1.0000 1.0000 1.87e-58 4auw-a1-m1-cB_4auw-a1-m1-cA
2 4auw-a1-m1-cB 85 85 0.9770 1.0000 1.0000 5.97e-57 4auw-a1-m1-cB_4auw-a1-m1-cA
3 4eot-a1-m1-cB 92 86 0.8161 0.7717 0.8256 1.44e-44 4eot-a1-m1-cA_4eot-a1-m1-cB
4 4eot-a1-m1-cA 92 86 0.8161 0.7717 0.8256 2.23e-44 4eot-a1-m1-cA_4eot-a1-m1-cB
5 3a5t-a2-m1-cB 90 87 0.5977 0.5778 0.5977 1.99e-26 3a5t-a2-m1-cA_3a5t-a2-m1-cB
6 3a5t-a2-m1-cA 90 87 0.5977 0.5778 0.5977 2.76e-26 3a5t-a2-m1-cA_3a5t-a2-m1-cB
7 4hhe-a1-m2-cA 297 20 0.1149 0.0337 0.5000 2.2 4hhe-a1-m1-cA_4hhe-a1-m2-cA
8 4hhe-a1-m1-cA 297 20 0.1149 0.0337 0.5000 2.2 4hhe-a1-m1-cA_4hhe-a1-m2-cA
9 2hyt-a1-m2-cA 188 56 0.1954 0.0904 0.3036 2.4 2hyt-a1-m1-cA_2hyt-a1-m2-cA
10 2hyt-a1-m1-cA 188 56 0.1954 0.0904 0.3036 2.4 2hyt-a1-m1-cA_2hyt-a1-m2-cA
11 4ywv-a1-m1-cB 455 38 0.1609 0.0308 0.3684 4.2 4ywv-a1-m1-cA_4ywv-a1-m1-cB
12 4ywv-a1-m1-cA 455 38 0.1609 0.0308 0.3684 4.2 4ywv-a1-m1-cA_4ywv-a1-m1-cB
13 3w01-a1-m1-cB 227 33 0.1379 0.0529 0.3636 6.1 3w01-a1-m1-cB_3w01-a1-m1-cA
14 4par-a1-m1-cB 313 87 0.2299 0.0639 0.2299 6.4 4par-a1-m1-cB_4par-a1-m1-cA
15 4par-a1-m1-cA 314 87 0.2299 0.0637 0.2299 6.6 4par-a1-m1-cA_4par-a1-m1-cC, 4par-a1-m1-cB_4par-a1-m1-cA
16 4par-a1-m1-cC 314 87 0.2299 0.0637 0.2299 7.0 4par-a1-m1-cA_4par-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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