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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
SDEDLLKAVRLIKFLYQSNPPPNPEGTRQARRNRRRRWRERQRQIHSISERILSTYLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6bsy-a1-m1-cA 58 58 1.0000 1.0000 1.0000 4.06e-37 6bsy-a1-m1-cB_6bsy-a1-m1-cA
2 3lph-a2-m1-cC 58 58 0.9655 0.9655 0.9655 5.21e-35 3lph-a2-m1-cD_3lph-a2-m1-cC
3 6bsy-a1-m1-cB 55 55 0.9483 1.0000 1.0000 1.14e-34 6bsy-a1-m1-cB_6bsy-a1-m1-cA
4 3lph-a2-m1-cD 57 57 0.9483 0.9649 0.9649 5.05e-34 3lph-a2-m1-cD_3lph-a2-m1-cC
5 4pmi-a2-m6-cC 52 52 0.8621 0.9615 0.9615 4.17e-30 4pmi-a2-m6-cC_4pmi-a2-m6-cB
6 4pmi-a2-m6-cB 53 53 0.8621 0.9434 0.9434 8.21e-17 4pmi-a2-m6-cC_4pmi-a2-m6-cB
7 4g56-a1-m2-cA 604 23 0.1552 0.0149 0.3913 1.9 4g56-a1-m2-cC_4g56-a1-m2-cA
8 4g56-a1-m1-cA 604 23 0.1552 0.0149 0.3913 1.9 4g56-a1-m2-cC_4g56-a1-m1-cA
9 7th4-a1-m1-cB 291 23 0.2069 0.0412 0.5217 4.2 7th4-a1-m1-cA_7th4-a1-m1-cB
10 7th4-a1-m1-cA 291 23 0.2069 0.0412 0.5217 4.2 7th4-a1-m1-cA_7th4-a1-m1-cB
11 3apy-a4-m1-cH 291 23 0.2069 0.0412 0.5217 4.2 3apy-a4-m1-cG_3apy-a4-m1-cH
12 3apy-a4-m1-cG 291 23 0.2069 0.0412 0.5217 4.2 3apy-a4-m1-cG_3apy-a4-m1-cH

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Reference:
Jacob Schwartz et al.

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