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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
SDEDSLKAVRLIKFLYQSNPPPNPEGTRQARRNRRRRWRERQRQIHSISERIRSTYL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lph-a2-m1-cC 58 57 1.0000 0.9828 1.0000 6.91e-36 3lph-a2-m1-cD_3lph-a2-m1-cC
2 3lph-a2-m1-cD 57 57 1.0000 1.0000 1.0000 7.28e-36 3lph-a2-m1-cD_3lph-a2-m1-cC
3 6bsy-a1-m1-cA 58 57 0.9649 0.9483 0.9649 4.96e-34 6bsy-a1-m1-cB_6bsy-a1-m1-cA
4 4pmi-a2-m6-cB 53 53 0.9123 0.9811 0.9811 5.16e-32 4pmi-a2-m6-cC_4pmi-a2-m6-cB
5 6bsy-a1-m1-cB 55 54 0.9123 0.9455 0.9630 1.02e-31 6bsy-a1-m1-cB_6bsy-a1-m1-cA
6 4pmi-a2-m6-cC 52 52 0.8947 0.9808 0.9808 4.59e-31 4pmi-a2-m6-cC_4pmi-a2-m6-cB
7 4jsb-a1-m3-cA 256 27 0.1754 0.0391 0.3704 6.0 4jsb-a1-m2-cA_4jsb-a1-m3-cA
8 4jsb-a1-m2-cA 256 27 0.1754 0.0391 0.3704 6.0 4jsb-a1-m2-cA_4jsb-a1-m3-cA
9 5jxl-a1-m9-cA 851 38 0.2456 0.0165 0.3684 9.1 5jxl-a1-m3-cA_5jxl-a1-m9-cA, 5jxl-a1-m4-cA_5jxl-a1-m9-cA
10 5jxl-a1-m4-cA 851 38 0.2456 0.0165 0.3684 9.1 5jxl-a1-m4-cA_5jxl-a1-m9-cA
11 5jxl-a1-m3-cA 851 38 0.2456 0.0165 0.3684 9.1 5jxl-a1-m3-cA_5jxl-a1-m9-cA
12 5jxl-a1-m11-cA 851 38 0.2456 0.0165 0.3684 9.1 5jxl-a1-m1-cA_5jxl-a1-m11-cA
13 5jxl-a1-m1-cA 851 38 0.2456 0.0165 0.3684 9.1 5jxl-a1-m1-cA_5jxl-a1-m11-cA

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Reference:
Jacob Schwartz et al.

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