Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=60)
SDFVVIKALEDGVNVIGLHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3aqd-a2-m1-cM 60 60 1.0000 1.0000 1.0000 6.88e-38 3aqd-a2-m1-cM_3aqd-a2-m1-cN
2 3aqd-a2-m1-cN 62 62 1.0000 0.9677 0.9677 6.99e-36 3aqd-a2-m1-cM_3aqd-a2-m1-cN
3 5eew-a1-m1-cH 68 68 1.0000 0.8824 0.8824 5.87e-35 5eew-a1-m1-cG_5eew-a1-m1-cH
4 5eew-a1-m1-cG 68 68 1.0000 0.8824 0.8824 5.87e-35 5eew-a1-m1-cG_5eew-a1-m1-cH
5 6rvw-a1-m1-cWF 55 58 0.8833 0.9636 0.9138 8.73e-30 6rvw-a1-m1-cQG_6rvw-a1-m1-cWF
6 6rvw-a1-m1-cQG 55 58 0.8833 0.9636 0.9138 8.73e-30 6rvw-a1-m1-cQG_6rvw-a1-m1-cWF
7 1wap-a2-m1-cV 67 66 0.8167 0.7313 0.7424 8.44e-27 1wap-a2-m1-cL_1wap-a2-m1-cV
8 1wap-a2-m1-cL 67 66 0.8167 0.7313 0.7424 8.44e-27 1wap-a2-m1-cL_1wap-a2-m1-cV
9 3zzl-a1-m4-cC 70 67 0.7167 0.6143 0.6418 6.91e-25 3zzl-a1-m4-cB_3zzl-a1-m4-cC
10 3zzl-a1-m4-cB 70 67 0.7167 0.6143 0.6418 6.91e-25 3zzl-a1-m4-cB_3zzl-a1-m4-cC
11 1mpy-a1-m1-cD 307 30 0.2000 0.0391 0.4000 5.2 1mpy-a1-m1-cA_1mpy-a1-m1-cD, 1mpy-a1-m1-cB_1mpy-a1-m1-cD, 1mpy-a1-m1-cC_1mpy-a1-m1-cD
12 1mpy-a1-m1-cC 307 30 0.2000 0.0391 0.4000 5.2 1mpy-a1-m1-cC_1mpy-a1-m1-cD
13 1mpy-a1-m1-cB 307 30 0.2000 0.0391 0.4000 5.2 1mpy-a1-m1-cB_1mpy-a1-m1-cD
14 1mpy-a1-m1-cA 307 30 0.2000 0.0391 0.4000 5.2 1mpy-a1-m1-cA_1mpy-a1-m1-cD
15 4b0t-a1-m1-cA 470 44 0.2500 0.0319 0.3409 5.9 4b0t-a1-m1-cA_4b0t-a1-m1-cB
16 4b0t-a1-m1-cB 472 44 0.2500 0.0318 0.3409 6.0 4b0t-a1-m1-cA_4b0t-a1-m1-cB
17 4trr-a2-m1-cG 226 39 0.2000 0.0531 0.3077 7.0 4trr-a2-m1-cG_4trr-a2-m1-cH
18 4trr-a2-m1-cH 256 39 0.2000 0.0469 0.3077 7.7 4trr-a2-m1-cG_4trr-a2-m1-cH
19 6v8i-a1-m1-cCD 314 34 0.2167 0.0414 0.3824 8.5 6v8i-a1-m1-cCC_6v8i-a1-m1-cCD
20 6v8i-a1-m1-cCC 314 34 0.2167 0.0414 0.3824 8.5 6v8i-a1-m1-cCC_6v8i-a1-m1-cCD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600