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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKD
DYDRAVKEFEANG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3nm9-a1-m1-cP 73 73 1.0000 1.0000 1.0000 1.48e-47 3nm9-a1-m1-cD_3nm9-a1-m1-cP
2 3nm9-a1-m1-cM 73 73 1.0000 1.0000 1.0000 1.48e-47 3nm9-a1-m1-cD_3nm9-a1-m1-cM
3 3nm9-a1-m1-cD 73 73 1.0000 1.0000 1.0000 1.48e-47 3nm9-a1-m1-cD_3nm9-a1-m1-cM, 3nm9-a1-m1-cD_3nm9-a1-m1-cP
4 4qr9-a1-m1-cB 75 71 0.3014 0.2933 0.3099 2.14e-06 4qr9-a1-m1-cA_4qr9-a1-m1-cB
5 4qr9-a1-m1-cA 75 71 0.3014 0.2933 0.3099 2.14e-06 4qr9-a1-m1-cA_4qr9-a1-m1-cB
6 4a3n-a1-m2-cA 64 40 0.1644 0.1875 0.3000 0.001 4a3n-a1-m1-cA_4a3n-a1-m2-cA
7 4a3n-a1-m1-cA 64 40 0.1644 0.1875 0.3000 0.001 4a3n-a1-m1-cA_4a3n-a1-m2-cA
8 7lbw-a1-m1-cA 193 44 0.2055 0.0777 0.3409 0.004 7lbw-a1-m1-cB_7lbw-a1-m1-cA
9 7lbw-a1-m1-cA 193 69 0.3151 0.1192 0.3333 0.87 7lbw-a1-m1-cB_7lbw-a1-m1-cA
10 7lbw-a1-m1-cB 190 44 0.2055 0.0789 0.3409 0.004 7lbw-a1-m1-cB_7lbw-a1-m1-cA
11 7lbw-a1-m1-cB 190 69 0.3151 0.1211 0.3333 0.87 7lbw-a1-m1-cB_7lbw-a1-m1-cA
12 3fgh-a1-m2-cA 67 69 0.3151 0.3433 0.3333 0.20 3fgh-a1-m1-cA_3fgh-a1-m2-cA
13 3fgh-a1-m1-cA 67 69 0.3151 0.3433 0.3333 0.20 3fgh-a1-m1-cA_3fgh-a1-m2-cA
14 2it9-a2-m1-cC 115 56 0.2740 0.1739 0.3571 0.83 2it9-a2-m1-cC_2it9-a2-m1-cD
15 2it9-a2-m1-cD 117 56 0.2740 0.1709 0.3571 0.84 2it9-a2-m1-cC_2it9-a2-m1-cD
16 4bmv-a5-m1-cJ 255 38 0.1781 0.0510 0.3421 2.7 4bmv-a5-m1-cJ_4bmv-a5-m1-cG
17 4bmv-a5-m1-cG 256 38 0.1781 0.0508 0.3421 2.7 4bmv-a5-m1-cJ_4bmv-a5-m1-cG
18 3qt7-a1-m1-cB 320 75 0.2877 0.0656 0.2800 6.3 3qt7-a1-m1-cB_3qt7-a1-m1-cA
19 3qt7-a1-m1-cA 324 46 0.2055 0.0463 0.3261 6.9 3qt7-a1-m1-cB_3qt7-a1-m1-cA
20 2vdv-a3-m1-cF 216 41 0.1918 0.0648 0.3415 7.9 2vdv-a3-m1-cF_2vdv-a3-m1-cE
21 2vdv-a3-m1-cE 216 41 0.1918 0.0648 0.3415 7.9 2vdv-a3-m1-cF_2vdv-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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