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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
SDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTV
RTFLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3eb5-a1-m2-cA 65 65 1.0000 1.0000 1.0000 4.78e-42 3eb5-a1-m1-cA_3eb5-a1-m2-cA
2 3eb5-a1-m1-cA 65 65 1.0000 1.0000 1.0000 4.78e-42 3eb5-a1-m1-cA_3eb5-a1-m2-cA
3 4auq-a1-m1-cE 57 58 0.6462 0.7368 0.7241 3.12e-25 4auq-a1-m1-cB_4auq-a1-m1-cE
4 4auq-a1-m1-cB 57 58 0.6462 0.7368 0.7241 3.12e-25 4auq-a1-m1-cB_4auq-a1-m1-cE
5 4ic3-a1-m1-cB 64 64 0.5231 0.5312 0.5312 1.52e-22 4ic3-a1-m1-cA_4ic3-a1-m1-cB
6 4ic3-a1-m1-cA 63 55 0.5077 0.5238 0.6000 4.60e-22 4ic3-a1-m1-cA_4ic3-a1-m1-cB
7 2yhn-a1-m1-cB 64 60 0.3846 0.3906 0.4167 3.34e-14 2yhn-a1-m1-cA_2yhn-a1-m1-cB
8 2yhn-a1-m1-cA 64 60 0.3846 0.3906 0.4167 3.34e-14 2yhn-a1-m1-cA_2yhn-a1-m1-cB
9 5zi6-a4-m1-cH 55 52 0.2154 0.2545 0.2692 2.62e-04 5zi6-a4-m1-cG_5zi6-a4-m1-cH
10 5zi6-a4-m1-cG 55 52 0.2154 0.2545 0.2692 2.62e-04 5zi6-a4-m1-cG_5zi6-a4-m1-cH
11 6fga-a4-m1-cH 77 51 0.3077 0.2597 0.3922 0.001 6fga-a4-m1-cG_6fga-a4-m1-cH
12 6fga-a4-m1-cG 77 51 0.3077 0.2597 0.3922 0.001 6fga-a4-m1-cG_6fga-a4-m1-cH
13 7ah2-a1-m1-cBBB 58 46 0.2769 0.3103 0.3913 0.002 7ah2-a1-m1-cAAA_7ah2-a1-m1-cBBB
14 7ah2-a1-m1-cAAA 58 46 0.2769 0.3103 0.3913 0.002 7ah2-a1-m1-cAAA_7ah2-a1-m1-cBBB
15 4whv-a2-m1-cJ 101 57 0.2615 0.1683 0.2982 0.41 4whv-a2-m1-cI_4whv-a2-m1-cJ
16 4whv-a2-m1-cI 101 57 0.2615 0.1683 0.2982 0.41 4whv-a2-m1-cI_4whv-a2-m1-cJ
17 4ayc-a1-m2-cB 126 57 0.2615 0.1349 0.2982 0.71 4ayc-a1-m2-cB_4ayc-a1-m1-cA
18 4ayc-a1-m1-cA 136 57 0.2615 0.1250 0.2982 0.80 4ayc-a1-m2-cB_4ayc-a1-m1-cA
19 5eya-a1-m1-cF 76 56 0.2769 0.2368 0.3214 1.2 5eya-a1-m1-cF_5eya-a1-m1-cG
20 5eya-a1-m1-cG 86 56 0.2769 0.2093 0.3214 1.3 5eya-a1-m1-cF_5eya-a1-m1-cG
21 2iuw-a1-m2-cA 204 23 0.1846 0.0588 0.5217 2.3 2iuw-a1-m1-cA_2iuw-a1-m2-cA
22 2iuw-a1-m1-cA 204 23 0.1846 0.0588 0.5217 2.3 2iuw-a1-m1-cA_2iuw-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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