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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
SDTTIVTVDHKDFDRTEKYLAEHFQLQNVDKADGHLMINAQKNYQVILKALSELDIYPKY
IETR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6u2d-a2-m2-cD 64 64 1.0000 1.0000 1.0000 7.85e-43 6u2d-a2-m1-cC_6u2d-a2-m2-cD
2 6u2d-a2-m1-cC 63 63 0.9844 1.0000 1.0000 4.15e-42 6u2d-a2-m1-cC_6u2d-a2-m2-cD
3 6xji-a1-m1-cD 290 64 1.0000 0.2207 1.0000 1.20e-40 6xji-a1-m1-cC_6xji-a1-m1-cD
4 6xji-a1-m1-cC 290 64 1.0000 0.2207 1.0000 1.20e-40 6xji-a1-m1-cC_6xji-a1-m1-cD
5 4pag-a3-m1-cB 317 53 0.2656 0.0536 0.3208 1.9 4pag-a3-m1-cB_4pag-a3-m1-cA
6 4pag-a3-m1-cA 318 53 0.2656 0.0535 0.3208 1.9 4pag-a3-m1-cB_4pag-a3-m1-cA
7 3pyi-a1-m1-cA 142 43 0.1875 0.0845 0.2791 2.6 3pyi-a1-m1-cA_3pyi-a1-m1-cB
8 8eip-a1-m1-cC 364 30 0.2500 0.0440 0.5333 3.7 8eip-a1-m1-cA_8eip-a1-m1-cC
9 8eip-a1-m1-cA 364 30 0.2500 0.0440 0.5333 3.7 8eip-a1-m1-cA_8eip-a1-m1-cC
10 8ein-a2-m1-cD 365 30 0.2500 0.0438 0.5333 3.7 8ein-a2-m1-cC_8ein-a2-m1-cD
11 8ein-a2-m1-cC 364 30 0.2500 0.0440 0.5333 3.9 8ein-a2-m1-cC_8ein-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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