Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=64)
SDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINS
LSMS

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6aez-a1-m3-cA 64 64 1.0000 1.0000 1.0000 4.18e-44 6aez-a1-m2-cA_6aez-a1-m3-cA
2 6aez-a1-m2-cA 64 64 1.0000 1.0000 1.0000 4.18e-44 6aez-a1-m2-cA_6aez-a1-m3-cA
3 5l2u-a2-m2-cI 65 64 0.9844 0.9692 0.9844 1.62e-43 5l2u-a2-m2-cG_5l2u-a2-m2-cI
4 5dnf-a1-m1-cG 65 64 0.9844 0.9692 0.9844 1.62e-43 5dnf-a1-m1-cE_5dnf-a1-m1-cG
5 5dnf-a1-m1-cE 65 64 0.9844 0.9692 0.9844 1.62e-43 5dnf-a1-m1-cE_5dnf-a1-m1-cG
6 5dnf-a1-m1-cD 65 64 0.9844 0.9692 0.9844 1.62e-43 5dnf-a1-m1-cA_5dnf-a1-m1-cD
7 5dnf-a1-m1-cA 65 64 0.9844 0.9692 0.9844 1.62e-43 5dnf-a1-m1-cA_5dnf-a1-m1-cD
8 5l2u-a2-m2-cH 64 64 0.9844 0.9844 0.9844 1.67e-43 5l2u-a2-m2-cG_5l2u-a2-m2-cH
9 5l2u-a2-m2-cG 64 64 0.9844 0.9844 0.9844 1.67e-43 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
10 1hrj-a1-m1-cB 68 64 0.9844 0.9265 0.9844 2.19e-43 1hrj-a1-m1-cA_1hrj-a1-m1-cB
11 1hrj-a1-m1-cA 68 64 0.9844 0.9265 0.9844 2.19e-43 1hrj-a1-m1-cA_1hrj-a1-m1-cB
12 2l9h-a1-m1-cC 67 64 0.9844 0.9403 0.9844 2.25e-43 2l9h-a1-m1-cA_2l9h-a1-m1-cC
13 2l9h-a1-m1-cA 67 64 0.9844 0.9403 0.9844 2.25e-43 2l9h-a1-m1-cA_2l9h-a1-m1-cC
14 6log-a1-m2-cA 63 63 0.9375 0.9524 0.9524 1.24e-40 6log-a1-m1-cA_6log-a1-m2-cA
15 6log-a1-m1-cA 63 63 0.9375 0.9524 0.9524 1.24e-40 6log-a1-m1-cA_6log-a1-m2-cA
16 2vxw-a1-m1-cB 69 64 0.9219 0.8551 0.9219 1.47e-40 2vxw-a1-m1-cD_2vxw-a1-m1-cB
17 2vxw-a1-m1-cA 69 64 0.9219 0.8551 0.9219 1.47e-40 2vxw-a1-m1-cD_2vxw-a1-m1-cA
18 2vxw-a1-m1-cD 62 62 0.9062 0.9355 0.9355 7.54e-40 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
19 5yam-a1-m1-cB 69 64 0.8281 0.7681 0.8281 2.59e-36 5yam-a1-m1-cA_5yam-a1-m1-cB
20 5yam-a1-m1-cA 69 64 0.8281 0.7681 0.8281 2.59e-36 5yam-a1-m1-cA_5yam-a1-m1-cB
21 2q8r-a2-m1-cG 63 56 0.3750 0.3810 0.4286 1.95e-16 2q8r-a2-m1-cF_2q8r-a2-m1-cG
22 2q8r-a2-m1-cF 63 56 0.3750 0.3810 0.4286 1.95e-16 2q8r-a2-m1-cF_2q8r-a2-m1-cG
23 4mhe-a2-m1-cB 69 59 0.3750 0.3478 0.4068 1.88e-15 4mhe-a2-m1-cC_4mhe-a2-m1-cB
24 4mhe-a2-m1-cC 61 58 0.3750 0.3934 0.4138 2.15e-15 4mhe-a2-m1-cC_4mhe-a2-m1-cB
25 2fj2-a2-m1-cC 68 59 0.3750 0.3529 0.4068 3.46e-15 2fj2-a2-m1-cD_2fj2-a2-m1-cC
26 2fj2-a2-m1-cD 67 59 0.3750 0.3582 0.4068 3.53e-15 2fj2-a2-m1-cD_2fj2-a2-m1-cC
27 2ra4-a4-m4-cB 65 59 0.2969 0.2923 0.3220 1.36e-11 2ra4-a4-m2-cB_2ra4-a4-m4-cB
28 2ra4-a4-m2-cB 65 59 0.2969 0.2923 0.3220 1.36e-11 2ra4-a4-m2-cB_2ra4-a4-m4-cB
29 2ra4-a2-m4-cB 65 59 0.2969 0.2923 0.3220 1.36e-11 2ra4-a2-m4-cA_2ra4-a2-m4-cB
30 2ra4-a2-m4-cA 65 59 0.2969 0.2923 0.3220 1.36e-11 2ra4-a2-m4-cA_2ra4-a2-m4-cB
31 5ltl-a1-m1-cA 67 58 0.3750 0.3582 0.4138 1.44e-11 5ltl-a1-m1-cA_5ltl-a1-m1-cB
32 5ltl-a1-m1-cB 68 58 0.3750 0.3529 0.4138 1.44e-11 5ltl-a1-m1-cA_5ltl-a1-m1-cB
33 1ncv-a1-m1-cB 76 61 0.3125 0.2632 0.3279 8.12e-11 1ncv-a1-m1-cA_1ncv-a1-m1-cB
34 1ncv-a1-m1-cA 76 61 0.3125 0.2632 0.3279 8.12e-11 1ncv-a1-m1-cA_1ncv-a1-m1-cB
35 7s5a-a1-m1-cA 73 59 0.3281 0.2877 0.3559 1.30e-09 7s5a-a1-m1-cA_7s5a-a1-m1-cB
36 7s5a-a1-m1-cB 76 58 0.3281 0.2763 0.3621 1.47e-09 7s5a-a1-m1-cA_7s5a-a1-m1-cB
37 1esr-a1-m2-cA 75 58 0.3281 0.2800 0.3621 1.60e-09 1esr-a1-m1-cA_1esr-a1-m2-cA
38 1esr-a1-m1-cA 75 58 0.3281 0.2800 0.3621 1.60e-09 1esr-a1-m1-cA_1esr-a1-m2-cA
39 1nr4-a5-m3-cF 66 62 0.3594 0.3485 0.3710 2.48e-09 1nr4-a5-m3-cF_1nr4-a5-m3-cE
40 1nr4-a5-m3-cE 69 62 0.3594 0.3333 0.3710 2.51e-09 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
41 1nr4-a5-m4-cG 66 59 0.3438 0.3333 0.3729 5.76e-09 1nr4-a5-m4-cG_1nr4-a5-m3-cE
42 1nr4-a5-m1-cA 67 59 0.3438 0.3284 0.3729 5.89e-09 1nr4-a5-m1-cA_1nr4-a5-m3-cE
43 2jp1-a1-m1-cB 60 52 0.3125 0.3333 0.3846 1.39e-08 2jp1-a1-m1-cA_2jp1-a1-m1-cB
44 2jp1-a1-m1-cA 60 52 0.3125 0.3333 0.3846 1.39e-08 2jp1-a1-m1-cA_2jp1-a1-m1-cB
45 2n54-a1-m1-cB 66 56 0.2969 0.2879 0.3393 7.66e-08 2n54-a1-m1-cA_2n54-a1-m1-cB
46 2n54-a1-m1-cA 66 56 0.2969 0.2879 0.3393 7.66e-08 2n54-a1-m1-cA_2n54-a1-m1-cB
47 5eki-a7-m1-cF 70 61 0.3281 0.3000 0.3443 9.93e-07 5eki-a7-m1-cF_5eki-a7-m1-cA
48 5eki-a7-m1-cA 72 61 0.3281 0.2917 0.3443 1.00e-06 5eki-a7-m1-cF_5eki-a7-m1-cA
49 1f2l-a1-m1-cC 64 48 0.2188 0.2188 0.2917 1.59e-05 1f2l-a1-m1-cC_1f2l-a1-m1-cD
50 1f2l-a1-m1-cA 64 48 0.2188 0.2188 0.2917 1.59e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD
51 1f2l-a1-m1-cD 70 48 0.2188 0.2000 0.2917 1.66e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
52 4oij-a1-m1-cB 71 56 0.2656 0.2394 0.3036 2.86e-05 4oij-a1-m1-cA_4oij-a1-m1-cB
53 4oij-a1-m1-cA 71 56 0.2656 0.2394 0.3036 2.86e-05 4oij-a1-m1-cA_4oij-a1-m1-cB
54 2hci-a1-m1-cB 65 59 0.3125 0.3077 0.3390 3.01e-05 2hci-a1-m1-cB_2hci-a1-m1-cA
55 2hci-a1-m1-cA 68 59 0.3125 0.2941 0.3390 3.46e-05 2hci-a1-m1-cB_2hci-a1-m1-cA
56 3hp3-a3-m1-cD 64 45 0.2344 0.2344 0.3333 0.001 3hp3-a3-m1-cD_3hp3-a3-m1-cF
57 3hp3-a3-m1-cF 65 45 0.2344 0.2308 0.3333 0.001 3hp3-a3-m1-cD_3hp3-a3-m1-cF
58 4uai-a1-m1-cB 67 43 0.2344 0.2239 0.3488 0.001 4uai-a1-m1-cB_4uai-a1-m1-cA
59 4uai-a1-m1-cA 68 43 0.2344 0.2206 0.3488 0.002 4uai-a1-m1-cB_4uai-a1-m1-cA
60 6gwi-a1-m1-cA 449 41 0.2188 0.0312 0.3415 0.17 6gwi-a1-m1-cA_6gwi-a1-m1-cB
61 6gwi-a1-m1-cB 450 41 0.2188 0.0311 0.3415 0.17 6gwi-a1-m1-cA_6gwi-a1-m1-cB
62 1qe6-a3-m2-cA 68 57 0.2188 0.2059 0.2456 0.34 1qe6-a3-m2-cA_1qe6-a3-m2-cB
63 1qe6-a3-m1-cD 72 57 0.2188 0.1944 0.2456 0.35 1qe6-a3-m2-cB_1qe6-a3-m1-cD
64 1qe6-a3-m2-cB 71 57 0.2188 0.1972 0.2456 0.36 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
65 2mgs-a1-m1-cB 71 40 0.1406 0.1268 0.2250 1.2 2mgs-a1-m1-cA_2mgs-a1-m1-cB
66 2mgs-a1-m1-cA 71 40 0.1406 0.1268 0.2250 1.2 2mgs-a1-m1-cA_2mgs-a1-m1-cB
67 4nar-a2-m2-cA 411 62 0.3281 0.0511 0.3387 1.6 4nar-a2-m1-cA_4nar-a2-m2-cA
68 4nar-a2-m1-cA 411 62 0.3281 0.0511 0.3387 1.6 4nar-a2-m1-cA_4nar-a2-m2-cA
69 1rod-a1-m1-cB 72 57 0.2188 0.1944 0.2456 4.9 1rod-a1-m1-cA_1rod-a1-m1-cB
70 1rod-a1-m1-cA 72 57 0.2188 0.1944 0.2456 4.9 1rod-a1-m1-cA_1rod-a1-m1-cB
71 3n52-a3-m1-cD 70 32 0.1250 0.1143 0.2500 8.0 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
72 2dfu-a2-m1-cD 247 12 0.1094 0.0283 0.5833 8.0 2dfu-a2-m1-cD_2dfu-a2-m1-cC
73 3n52-a3-m1-cB 71 32 0.1250 0.1127 0.2500 8.7 3n52-a3-m1-cD_3n52-a3-m1-cB
74 3n52-a3-m1-cC 67 32 0.1250 0.1194 0.2500 8.7 3n52-a3-m1-cC_3n52-a3-m1-cD
75 2dfu-a2-m1-cC 249 12 0.1094 0.0281 0.5833 8.8 2dfu-a2-m1-cD_2dfu-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600