Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
SDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVM
QYTRGNQTRAALMMGINRGTLRKKLKKYGMN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ihw-a1-m1-cA 91 91 1.0000 1.0000 1.0000 1.55e-62 4ihw-a1-m1-cA_4ihw-a1-m1-cB
2 4ihw-a1-m1-cB 98 91 1.0000 0.9286 1.0000 1.60e-62 4ihw-a1-m1-cA_4ihw-a1-m1-cB
3 1ety-a1-m1-cB 78 83 0.8242 0.9615 0.9036 3.61e-46 1ety-a1-m1-cA_1ety-a1-m1-cB
4 1ety-a1-m1-cA 74 77 0.7802 0.9595 0.9221 5.29e-45 1ety-a1-m1-cA_1ety-a1-m1-cB
5 6m10-a3-m3-cD 81 71 0.4835 0.5432 0.6197 5.57e-29 6m10-a3-m1-cD_6m10-a3-m3-cD
6 6m10-a3-m1-cD 81 71 0.4835 0.5432 0.6197 5.57e-29 6m10-a3-m1-cD_6m10-a3-m3-cD
7 1ntc-a1-m1-cB 91 42 0.1758 0.1758 0.3810 5.94e-04 1ntc-a1-m1-cA_1ntc-a1-m1-cB
8 1ntc-a1-m1-cA 91 42 0.1758 0.1758 0.3810 5.94e-04 1ntc-a1-m1-cA_1ntc-a1-m1-cB
9 4l5e-a1-m2-cA 46 32 0.1319 0.2609 0.3750 6.6 4l5e-a1-m1-cA_4l5e-a1-m2-cA
10 4l5e-a1-m1-cA 46 32 0.1319 0.2609 0.3750 6.6 4l5e-a1-m1-cA_4l5e-a1-m2-cA
11 3abz-a1-m1-cD 823 29 0.1209 0.0134 0.3793 7.5 3abz-a1-m1-cB_3abz-a1-m1-cD, 3abz-a1-m1-cD_3abz-a1-m1-cC
12 3abz-a1-m1-cC 826 29 0.1209 0.0133 0.3793 7.6 3abz-a1-m1-cD_3abz-a1-m1-cC
13 3abz-a1-m1-cB 800 29 0.1209 0.0138 0.3793 8.1 3abz-a1-m1-cB_3abz-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600