Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
SDYYNRSTSPWNLHRNEDPERYPSVIWEAKCRHLGCINADGNVDYHMNSVPIQQEILVLR
REPPHCPNSFRLEKILVSVGCTCVTPIVH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6wir-a1-m2-cC 89 89 1.0000 1.0000 1.0000 1.40e-63 6wir-a1-m1-cC_6wir-a1-m2-cC
2 6wir-a1-m1-cC 89 89 1.0000 1.0000 1.0000 1.40e-63 6wir-a1-m1-cC_6wir-a1-m2-cC
3 5vb9-a1-m2-cA 108 89 0.9775 0.8056 0.9775 6.17e-62 5vb9-a1-m1-cA_5vb9-a1-m2-cA
4 5vb9-a1-m1-cA 108 89 0.9775 0.8056 0.9775 6.17e-62 5vb9-a1-m1-cA_5vb9-a1-m2-cA
5 2vxs-a2-m1-cA 86 89 0.8989 0.9302 0.8989 3.32e-53 2vxs-a2-m1-cB_2vxs-a2-m1-cA
6 2vxs-a2-m1-cB 80 88 0.8427 0.9375 0.8523 1.53e-46 2vxs-a2-m1-cB_2vxs-a2-m1-cA
7 1jpy-a1-m1-cB 121 83 0.5955 0.4380 0.6386 1.73e-33 1jpy-a1-m1-cA_1jpy-a1-m1-cB
8 1jpy-a1-m1-cA 121 83 0.5955 0.4380 0.6386 1.73e-33 1jpy-a1-m1-cA_1jpy-a1-m1-cB
9 7uwk-a1-m1-cE 96 92 0.3034 0.2812 0.2935 8.03e-04 7uwk-a1-m1-cE_7uwk-a1-m1-cG
10 7uwk-a1-m1-cG 100 92 0.3034 0.2700 0.2935 0.001 7uwk-a1-m1-cE_7uwk-a1-m1-cG
11 3k8e-a2-m1-cA 242 34 0.1236 0.0455 0.3235 5.2 3k8e-a2-m1-cA_3k8e-a2-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600