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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
SEACRDGLRAVECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVALASLDAEKAQGQKK
VEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3mqc-a2-m2-cD 97 97 1.0000 1.0000 1.0000 3.06e-65 3mqc-a2-m1-cA_3mqc-a2-m2-cD, 3mqc-a2-m1-cC_3mqc-a2-m2-cD, 3mqc-a2-m2-cB_3mqc-a2-m2-cD
2 3mqc-a2-m2-cB 97 97 1.0000 1.0000 1.0000 3.06e-65 3mqc-a2-m2-cB_3mqc-a2-m2-cD
3 3mqc-a2-m1-cC 97 97 1.0000 1.0000 1.0000 3.06e-65 3mqc-a2-m1-cA_3mqc-a2-m1-cC, 3mqc-a2-m1-cC_3mqc-a2-m2-cD
4 3mqc-a2-m1-cA 97 97 1.0000 1.0000 1.0000 3.06e-65 3mqc-a2-m1-cA_3mqc-a2-m1-cC, 3mqc-a2-m1-cA_3mqc-a2-m2-cD
5 3mqb-a2-m3-cA 109 100 0.9794 0.8716 0.9500 3.66e-61 3mqb-a2-m3-cB_3mqb-a2-m3-cA
6 3mqb-a2-m1-cA 109 100 0.9794 0.8716 0.9500 3.66e-61 3mqb-a2-m3-cB_3mqb-a2-m1-cA
7 3mqb-a1-m1-cA 109 100 0.9794 0.8716 0.9500 3.66e-61 3mqb-a1-m2-cE_3mqb-a1-m1-cA, 3mqb-a1-m2-cF_3mqb-a1-m1-cA
8 3mqb-a3-m1-cE 106 100 0.9794 0.8962 0.9500 4.73e-61 3mqb-a3-m4-cF_3mqb-a3-m1-cE
9 3mqb-a2-m3-cB 106 100 0.9794 0.8962 0.9500 4.73e-61 3mqb-a2-m3-cB_3mqb-a2-m1-cA, 3mqb-a2-m3-cB_3mqb-a2-m3-cA
10 3mqb-a1-m2-cE 106 100 0.9794 0.8962 0.9500 4.73e-61 3mqb-a1-m1-cB_3mqb-a1-m2-cE, 3mqb-a1-m2-cE_3mqb-a1-m1-cA
11 3mqb-a1-m1-cB 106 100 0.9794 0.8962 0.9500 4.73e-61 3mqb-a1-m1-cB_3mqb-a1-m2-cE
12 3mqb-a3-m4-cF 102 100 0.9794 0.9314 0.9500 9.40e-61 3mqb-a3-m4-cF_3mqb-a3-m1-cE
13 3mqb-a1-m2-cF 102 100 0.9794 0.9314 0.9500 9.40e-61 3mqb-a1-m2-cF_3mqb-a1-m1-cA
14 2x7a-a6-m2-cK 37 37 0.3814 1.0000 1.0000 5.74e-20 2x7a-a6-m1-cK_2x7a-a6-m2-cK
15 2x7a-a6-m1-cK 37 37 0.3814 1.0000 1.0000 5.74e-20 2x7a-a6-m1-cK_2x7a-a6-m2-cK
16 3ni0-a1-m1-cA 95 81 0.4021 0.4105 0.4815 3.81e-16 3ni0-a1-m1-cB_3ni0-a1-m1-cA
17 3ni0-a1-m1-cB 87 80 0.3918 0.4368 0.4750 2.07e-15 3ni0-a1-m1-cB_3ni0-a1-m1-cA
18 5vod-a2-m4-cC 131 36 0.1546 0.1145 0.4167 0.27 5vod-a2-m1-cC_5vod-a2-m4-cC
19 5vod-a2-m1-cC 131 36 0.1546 0.1145 0.4167 0.27 5vod-a2-m1-cC_5vod-a2-m4-cC
20 6ys4-a3-m1-cE 102 45 0.1649 0.1569 0.3556 1.1 6ys4-a3-m1-cF_6ys4-a3-m1-cE
21 6ys4-a3-m1-cF 100 41 0.1546 0.1500 0.3659 1.3 6ys4-a3-m1-cF_6ys4-a3-m1-cE
22 5hsq-a1-m2-cA 488 47 0.1753 0.0348 0.3617 2.3 5hsq-a1-m1-cA_5hsq-a1-m2-cA
23 5hsq-a1-m1-cA 488 47 0.1753 0.0348 0.3617 2.3 5hsq-a1-m1-cA_5hsq-a1-m2-cA
24 5i5l-a1-m2-cA 480 47 0.1753 0.0354 0.3617 2.3 5i5l-a1-m1-cA_5i5l-a1-m2-cA
25 5i5l-a1-m1-cA 480 47 0.1753 0.0354 0.3617 2.3 5i5l-a1-m1-cA_5i5l-a1-m2-cA
26 3hpk-a3-m1-cB 107 69 0.2062 0.1869 0.2899 4.2 3hpk-a3-m1-cB_3hpk-a3-m1-cA
27 3hpk-a3-m1-cA 112 69 0.2062 0.1786 0.2899 4.4 3hpk-a3-m1-cB_3hpk-a3-m1-cA
28 4bwd-a2-m2-cC 61 52 0.1959 0.3115 0.3654 7.1 4bwd-a2-m1-cC_4bwd-a2-m2-cC
29 4bwd-a2-m1-cC 61 52 0.1959 0.3115 0.3654 7.1 4bwd-a2-m1-cC_4bwd-a2-m2-cC

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Reference:
Jacob Schwartz et al.

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