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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
SEALGMIETKGLVGSIEAADAMVDAANVTLIGKEHVGGGLVTVLVRGDVGAVKAATDAGA
AAAQRVGELVSVHVIPRPHIEVETIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7mmx-a2-m1-cD 86 86 1.0000 1.0000 1.0000 4.53e-54 7mmx-a2-m3-cF_7mmx-a2-m1-cD
2 7mmx-a2-m3-cF 85 85 0.9884 1.0000 1.0000 3.14e-53 7mmx-a2-m3-cF_7mmx-a2-m1-cD
3 4axj-a1-m1-cA 87 86 0.8488 0.8391 0.8488 1.73e-38 4axj-a1-m2-cC_4axj-a1-m1-cA
4 4axj-a1-m2-cC 86 85 0.8488 0.8488 0.8588 2.55e-38 4axj-a1-m2-cC_4axj-a1-m1-cA
5 5d6v-a1-m6-cA 90 86 0.7209 0.6889 0.7209 2.83e-31 5d6v-a1-m2-cA_5d6v-a1-m6-cA
6 5d6v-a1-m2-cA 90 86 0.7209 0.6889 0.7209 2.83e-31 5d6v-a1-m2-cA_5d6v-a1-m6-cA
7 3mpy-a1-m6-cA 96 85 0.7093 0.6354 0.7176 4.71e-30 3mpy-a1-m2-cA_3mpy-a1-m6-cA
8 3mpy-a1-m2-cA 96 85 0.7093 0.6354 0.7176 4.71e-30 3mpy-a1-m2-cA_3mpy-a1-m6-cA
9 7ckc-a1-m1-cCz 89 85 0.6512 0.6292 0.6588 2.69e-29 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
10 7ckc-a1-m1-cBi 89 85 0.6512 0.6292 0.6588 2.69e-29 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
11 2ewh-a1-m6-cA 92 85 0.6512 0.6087 0.6588 3.26e-29 2ewh-a1-m2-cA_2ewh-a1-m6-cA
12 2ewh-a1-m2-cA 92 85 0.6512 0.6087 0.6588 3.26e-29 2ewh-a1-m2-cA_2ewh-a1-m6-cA
13 3dnc-a1-m6-cA 90 86 0.5581 0.5333 0.5581 9.99e-26 3dnc-a1-m2-cA_3dnc-a1-m6-cA
14 3dnc-a1-m2-cA 90 86 0.5581 0.5333 0.5581 9.99e-26 3dnc-a1-m2-cA_3dnc-a1-m6-cA
15 3ssq-a1-m2-cC 100 86 0.5581 0.4800 0.5581 1.25e-25 3ssq-a1-m1-cC_3ssq-a1-m2-cC
16 3ssq-a1-m1-cC 100 86 0.5581 0.4800 0.5581 1.25e-25 3ssq-a1-m1-cC_3ssq-a1-m2-cC
17 7mgp-a1-m6-cA 93 85 0.5930 0.5484 0.6000 3.12e-24 7mgp-a1-m2-cA_7mgp-a1-m6-cA
18 7mgp-a1-m2-cA 93 85 0.5930 0.5484 0.6000 3.12e-24 7mgp-a1-m2-cA_7mgp-a1-m6-cA
19 6owg-a1-m1-cDA 100 86 0.5349 0.4600 0.5349 3.74e-24 6owg-a1-m1-cC8_6owg-a1-m1-cDA
20 6owg-a1-m1-cC8 100 86 0.5349 0.4600 0.5349 3.74e-24 6owg-a1-m1-cC8_6owg-a1-m1-cDA
21 6owf-a1-m1-cW 100 86 0.5349 0.4600 0.5349 3.74e-24 6owf-a1-m1-cA6_6owf-a1-m1-cW
22 6owf-a1-m1-cA6 100 86 0.5349 0.4600 0.5349 3.74e-24 6owf-a1-m1-cA6_6owf-a1-m1-cW
23 4ox6-a1-m3-cA 103 88 0.4302 0.3592 0.4205 1.04e-15 4ox6-a1-m3-cB_4ox6-a1-m3-cA
24 4ox6-a1-m3-cB 93 87 0.4302 0.3978 0.4253 1.23e-15 4ox6-a1-m3-cB_4ox6-a1-m3-cA
25 2a10-a1-m1-cE 102 88 0.4186 0.3529 0.4091 1.68e-12 2a10-a1-m1-cD_2a10-a1-m1-cE
26 2a10-a1-m1-cD 102 88 0.4186 0.3529 0.4091 1.68e-12 2a10-a1-m1-cD_2a10-a1-m1-cE
27 3pac-a1-m3-cA 183 81 0.3837 0.1803 0.4074 1.09e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 82 0.3372 0.1585 0.3537 4.05e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 81 0.3837 0.1803 0.4074 1.09e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 82 0.3372 0.1585 0.3537 4.05e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 84 0.3605 0.1782 0.3690 5.87e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m3-cA 174 80 0.3605 0.1782 0.3875 3.08e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a2-m2-cA 174 84 0.3605 0.1782 0.3690 5.87e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
34 3nwg-a2-m2-cA 174 80 0.3605 0.1782 0.3875 3.08e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
35 3nwg-a1-m6-cA 174 84 0.3605 0.1782 0.3690 5.87e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
36 3nwg-a1-m6-cA 174 80 0.3605 0.1782 0.3875 3.08e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
37 3nwg-a1-m3-cA 174 84 0.3605 0.1782 0.3690 5.87e-07 3nwg-a1-m3-cA_3nwg-a1-m6-cA
38 3nwg-a1-m3-cA 174 80 0.3605 0.1782 0.3875 3.08e-04 3nwg-a1-m3-cA_3nwg-a1-m6-cA
39 3nwg-a1-m1-cA 174 84 0.3605 0.1782 0.3690 5.87e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA
40 3nwg-a1-m1-cA 174 80 0.3605 0.1782 0.3875 3.08e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA
41 4axi-a1-m3-cA 116 54 0.2093 0.1552 0.3333 4.0 4axi-a1-m3-cB_4axi-a1-m3-cA
42 4axi-a1-m2-cA 116 54 0.2093 0.1552 0.3333 4.0 4axi-a1-m3-cB_4axi-a1-m2-cA
43 4axi-a1-m3-cB 115 54 0.2093 0.1565 0.3333 4.0 4axi-a1-m3-cB_4axi-a1-m2-cA, 4axi-a1-m3-cB_4axi-a1-m3-cA
44 1wpw-a2-m3-cB 336 49 0.1860 0.0476 0.3265 5.7 1wpw-a2-m1-cA_1wpw-a2-m3-cB, 1wpw-a2-m1-cB_1wpw-a2-m3-cB, 1wpw-a2-m3-cA_1wpw-a2-m3-cB
45 1wpw-a2-m3-cA 336 49 0.1860 0.0476 0.3265 5.7 1wpw-a2-m3-cA_1wpw-a2-m3-cB
46 1wpw-a2-m1-cB 336 49 0.1860 0.0476 0.3265 5.7 1wpw-a2-m1-cB_1wpw-a2-m3-cB
47 1wpw-a2-m1-cA 336 49 0.1860 0.0476 0.3265 5.7 1wpw-a2-m1-cA_1wpw-a2-m3-cB
48 1wpw-a1-m2-cB 336 49 0.1860 0.0476 0.3265 5.7 1wpw-a1-m1-cA_1wpw-a1-m2-cB, 1wpw-a1-m1-cB_1wpw-a1-m2-cB
49 1wpw-a1-m1-cB 336 49 0.1860 0.0476 0.3265 5.7 1wpw-a1-m1-cB_1wpw-a1-m2-cB
50 1wpw-a1-m1-cA 336 49 0.1860 0.0476 0.3265 5.7 1wpw-a1-m1-cA_1wpw-a1-m2-cB
51 8bbp-a1-m1-cA 344 27 0.1395 0.0349 0.4444 6.0 8bbp-a1-m1-cA_8bbp-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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