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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3nr7-a1-m2-cB 81 57 1.0000 0.7037 1.0000 5.39e-31 3nr7-a1-m1-cA_3nr7-a1-m2-cB
2 3nr7-a1-m1-cA 81 57 1.0000 0.7037 1.0000 5.39e-31 3nr7-a1-m1-cA_3nr7-a1-m2-cB
3 1lr1-a1-m1-cB 57 57 1.0000 1.0000 1.0000 6.32e-31 1lr1-a1-m1-cA_1lr1-a1-m1-cB
4 1lr1-a1-m1-cA 57 57 1.0000 1.0000 1.0000 6.32e-31 1lr1-a1-m1-cA_1lr1-a1-m1-cB
5 4icg-a1-m1-cB 43 44 0.6491 0.8605 0.8409 8.60e-09 4icg-a1-m1-cA_4icg-a1-m1-cB
6 4icg-a1-m1-cA 43 44 0.6491 0.8605 0.8409 8.60e-09 4icg-a1-m1-cA_4icg-a1-m1-cB
7 1ov9-a1-m1-cA 45 43 0.4561 0.5778 0.6047 4.16e-08 1ov9-a1-m1-cA_1ov9-a1-m1-cB
8 1ov9-a1-m1-cB 48 39 0.4211 0.5000 0.6154 4.27e-07 1ov9-a1-m1-cA_1ov9-a1-m1-cB
9 5d39-a1-m1-cB 483 37 0.2281 0.0269 0.3514 2.0 5d39-a1-m1-cB_5d39-a1-m1-cA
10 5d39-a2-m1-cA 488 37 0.2281 0.0266 0.3514 2.0 5d39-a2-m1-cC_5d39-a2-m1-cA
11 5d39-a1-m1-cA 488 37 0.2281 0.0266 0.3514 2.0 5d39-a1-m1-cB_5d39-a1-m1-cA
12 5d39-a2-m1-cC 483 37 0.2281 0.0269 0.3514 2.1 5d39-a2-m1-cC_5d39-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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