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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
SECVSEMLDLEKQFSELKEKLF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xus-a1-m3-cB 40 22 1.0000 0.5500 1.0000 9.85e-09 2xus-a1-m2-cB_2xus-a1-m3-cB
2 2xus-a1-m2-cB 40 22 1.0000 0.5500 1.0000 9.85e-09 2xus-a1-m2-cB_2xus-a1-m3-cB
3 4auv-a3-m3-cC 35 22 1.0000 0.6286 1.0000 1.04e-08 4auv-a3-m3-cH_4auv-a3-m3-cC
4 4auv-a2-m3-cC 35 22 1.0000 0.6286 1.0000 1.04e-08 4auv-a2-m5-cG_4auv-a2-m3-cC
5 4auv-a1-m1-cA 35 22 1.0000 0.6286 1.0000 1.04e-08 4auv-a1-m2-cB_4auv-a1-m1-cA
6 4auv-a2-m5-cG 27 22 1.0000 0.8148 1.0000 1.36e-08 4auv-a2-m1-cH_4auv-a2-m5-cG, 4auv-a2-m5-cG_4auv-a2-m3-cC
7 4auv-a1-m2-cB 27 22 1.0000 0.8148 1.0000 1.36e-08 4auv-a1-m2-cB_4auv-a1-m1-cA
8 4auv-a3-m3-cH 22 22 1.0000 1.0000 1.0000 1.65e-08 4auv-a3-m3-cH_4auv-a3-m3-cC
9 4auv-a2-m1-cH 22 22 1.0000 1.0000 1.0000 1.65e-08 4auv-a2-m1-cH_4auv-a2-m5-cG
10 4auv-a1-m2-cE 21 20 0.9091 0.9524 1.0000 4.11e-07 4auv-a1-m2-cD_4auv-a1-m2-cE
11 4auv-a1-m2-cD 18 18 0.8182 1.0000 1.0000 6.90e-06 4auv-a1-m2-cD_4auv-a1-m2-cE
12 1ddz-a1-m1-cB 481 15 0.4545 0.0208 0.6667 3.5 1ddz-a1-m1-cA_1ddz-a1-m1-cB
13 1ddz-a1-m1-cA 481 15 0.4545 0.0208 0.6667 3.5 1ddz-a1-m1-cA_1ddz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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