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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
SECVSEMLDLEKQFSELKEKLFRERLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4auv-a2-m5-cG 27 27 1.0000 1.0000 1.0000 6.34e-12 4auv-a2-m1-cH_4auv-a2-m5-cG, 4auv-a2-m5-cG_4auv-a2-m3-cC
2 4auv-a1-m2-cB 27 27 1.0000 1.0000 1.0000 6.34e-12 4auv-a1-m2-cB_4auv-a1-m1-cA
3 4auv-a3-m3-cC 35 27 1.0000 0.7714 1.0000 6.89e-12 4auv-a3-m3-cH_4auv-a3-m3-cC
4 4auv-a2-m3-cC 35 27 1.0000 0.7714 1.0000 6.89e-12 4auv-a2-m5-cG_4auv-a2-m3-cC
5 4auv-a1-m1-cA 35 27 1.0000 0.7714 1.0000 6.89e-12 4auv-a1-m2-cB_4auv-a1-m1-cA
6 2xus-a1-m3-cB 40 27 1.0000 0.6750 1.0000 8.12e-12 2xus-a1-m2-cB_2xus-a1-m3-cB
7 2xus-a1-m2-cB 40 27 1.0000 0.6750 1.0000 8.12e-12 2xus-a1-m2-cB_2xus-a1-m3-cB
8 4auv-a3-m3-cH 22 22 0.8148 1.0000 1.0000 1.67e-08 4auv-a3-m3-cH_4auv-a3-m3-cC
9 4auv-a2-m1-cH 22 22 0.8148 1.0000 1.0000 1.67e-08 4auv-a2-m1-cH_4auv-a2-m5-cG
10 4auv-a1-m2-cE 21 20 0.7407 0.9524 1.0000 4.83e-07 4auv-a1-m2-cD_4auv-a1-m2-cE
11 4auv-a1-m2-cD 18 18 0.6667 1.0000 1.0000 7.78e-06 4auv-a1-m2-cD_4auv-a1-m2-cE
12 1ddz-a1-m1-cB 481 15 0.3704 0.0208 0.6667 4.9 1ddz-a1-m1-cA_1ddz-a1-m1-cB
13 1ddz-a1-m1-cA 481 15 0.3704 0.0208 0.6667 4.9 1ddz-a1-m1-cA_1ddz-a1-m1-cB
14 3jbh-a1-m8-cG 962 24 0.4074 0.0114 0.4583 7.5 3jbh-a1-m8-cG_3jbh-a1-m8-cH
15 3jbh-a1-m8-cH 964 24 0.4074 0.0114 0.4583 7.7 3jbh-a1-m8-cG_3jbh-a1-m8-cH

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Reference:
Jacob Schwartz et al.

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