Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=97)
SEERHIICELRCEPENRERVKELVLKFVEPARLETGCLYYDLYQKIDEPDTFYIIDGWVN
QEAVTSHAENPHVAEVMSDLQPLLTFGPSISLITRVS

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4zos-a2-m1-cA 105 97 1.0000 0.9238 1.0000 1.20e-69 4zos-a2-m1-cB_4zos-a2-m1-cA
2 4zos-a2-m1-cB 97 97 1.0000 1.0000 1.0000 3.29e-69 4zos-a2-m1-cB_4zos-a2-m1-cA
3 1x7v-a7-m1-cC 97 79 0.2371 0.2371 0.2911 2.46e-06 1x7v-a7-m3-cA_1x7v-a7-m1-cC
4 1x7v-a5-m1-cC 97 79 0.2371 0.2371 0.2911 2.46e-06 1x7v-a5-m1-cB_1x7v-a5-m1-cC
5 1x7v-a7-m3-cA 96 67 0.2165 0.2188 0.3134 2.72e-06 1x7v-a7-m3-cA_1x7v-a7-m1-cC
6 1x7v-a5-m1-cB 96 67 0.2165 0.2188 0.3134 2.72e-06 1x7v-a5-m1-cB_1x7v-a5-m1-cC
7 1x7v-a4-m2-cB 96 67 0.2165 0.2188 0.3134 2.72e-06 1x7v-a4-m2-cA_1x7v-a4-m2-cB
8 1x7v-a4-m2-cA 96 67 0.2165 0.2188 0.3134 2.72e-06 1x7v-a4-m2-cA_1x7v-a4-m2-cB
9 2fb0-a1-m2-cA 91 74 0.2165 0.2308 0.2838 3.36e-06 2fb0-a1-m1-cA_2fb0-a1-m2-cA
10 2fb0-a1-m1-cA 91 74 0.2165 0.2308 0.2838 3.36e-06 2fb0-a1-m1-cA_2fb0-a1-m2-cA
11 1y0h-a1-m1-cB 98 89 0.2165 0.2143 0.2360 1.39e-05 1y0h-a1-m1-cB_1y0h-a1-m1-cA
12 1y0h-a1-m1-cA 101 80 0.2165 0.2079 0.2625 1.41e-05 1y0h-a1-m1-cB_1y0h-a1-m1-cA
13 3e8o-a1-m1-cB 98 74 0.2165 0.2143 0.2838 2.37e-05 3e8o-a1-m1-cB_3e8o-a1-m1-cA
14 3e8o-a1-m1-cA 99 74 0.2165 0.2121 0.2838 2.49e-05 3e8o-a1-m1-cB_3e8o-a1-m1-cA
15 3qmq-a2-m1-cB 97 55 0.1856 0.1856 0.3273 7.80e-04 3qmq-a2-m1-cB_3qmq-a2-m1-cC
16 3qmq-a2-m1-cC 99 55 0.1856 0.1818 0.3273 0.001 3qmq-a2-m1-cB_3qmq-a2-m1-cC
17 2gff-a1-m1-cA 94 50 0.1649 0.1702 0.3200 0.001 2gff-a1-m1-cA_2gff-a1-m1-cB
18 2gff-a1-m1-cB 97 50 0.1649 0.1649 0.3200 0.001 2gff-a1-m1-cA_2gff-a1-m1-cB
19 4dpo-a1-m1-cA 99 70 0.1959 0.1919 0.2714 0.005 4dpo-a1-m1-cB_4dpo-a1-m1-cA
20 4dpo-a1-m1-cB 98 70 0.1959 0.1939 0.2714 0.006 4dpo-a1-m1-cB_4dpo-a1-m1-cA
21 4dn9-a2-m2-cB 94 75 0.2165 0.2234 0.2800 0.014 4dn9-a2-m2-cB_4dn9-a2-m2-cA
22 4dn9-a2-m2-cA 95 75 0.2165 0.2211 0.2800 0.015 4dn9-a2-m1-cA_4dn9-a2-m2-cA, 4dn9-a2-m2-cB_4dn9-a2-m2-cA
23 4dn9-a2-m1-cA 95 75 0.2165 0.2211 0.2800 0.015 4dn9-a2-m1-cA_4dn9-a2-m2-cA
24 4hl9-a4-m1-cH 91 63 0.2062 0.2198 0.3175 0.13 4hl9-a4-m1-cG_4hl9-a4-m1-cH
25 4hl9-a4-m1-cG 91 63 0.2062 0.2198 0.3175 0.13 4hl9-a4-m1-cG_4hl9-a4-m1-cH
26 3kkf-a2-m6-cA 100 61 0.1649 0.1600 0.2623 0.49 3kkf-a2-m1-cA_3kkf-a2-m6-cA, 3kkf-a2-m3-cA_3kkf-a2-m6-cA
27 3kkf-a2-m3-cA 100 61 0.1649 0.1600 0.2623 0.49 3kkf-a2-m3-cA_3kkf-a2-m6-cA
28 3kkf-a2-m1-cA 100 61 0.1649 0.1600 0.2623 0.49 3kkf-a2-m1-cA_3kkf-a2-m6-cA
29 1tuv-a2-m3-cA 103 78 0.2062 0.1942 0.2564 0.55 1tuv-a2-m1-cA_1tuv-a2-m3-cA
30 1tuv-a2-m1-cA 103 78 0.2062 0.1942 0.2564 0.55 1tuv-a2-m1-cA_1tuv-a2-m3-cA
31 1tuv-a1-m2-cA 103 78 0.2062 0.1942 0.2564 0.55 1tuv-a1-m1-cA_1tuv-a1-m2-cA
32 1tuv-a1-m1-cA 103 78 0.2062 0.1942 0.2564 0.55 1tuv-a1-m1-cA_1tuv-a1-m2-cA
33 2bbe-a2-m4-cA 103 54 0.1443 0.1359 0.2593 1.0 2bbe-a2-m1-cA_2bbe-a2-m4-cA
34 2bbe-a2-m1-cA 103 54 0.1443 0.1359 0.2593 1.0 2bbe-a2-m1-cA_2bbe-a2-m4-cA
35 2bbe-a1-m4-cA 103 54 0.1443 0.1359 0.2593 1.0 2bbe-a1-m3-cA_2bbe-a1-m4-cA
36 2bbe-a1-m3-cA 103 54 0.1443 0.1359 0.2593 1.0 2bbe-a1-m3-cA_2bbe-a1-m4-cA
37 4zo2-a1-m1-cA 293 37 0.1237 0.0410 0.3243 2.6 4zo2-a1-m1-cA_4zo2-a1-m1-cB
38 4zo2-a1-m1-cB 294 37 0.1237 0.0408 0.3243 2.6 4zo2-a1-m1-cA_4zo2-a1-m1-cB
39 3eus-a1-m1-cA 85 22 0.0928 0.1059 0.4091 3.4 3eus-a1-m1-cB_3eus-a1-m1-cA
40 3eus-a1-m1-cB 77 22 0.0928 0.1169 0.4091 3.7 3eus-a1-m1-cB_3eus-a1-m1-cA
41 7ru7-a1-m2-cA 411 30 0.0928 0.0219 0.3000 6.9 7ru7-a1-m1-cA_7ru7-a1-m2-cA
42 7ru7-a1-m1-cA 411 30 0.0928 0.0219 0.3000 6.9 7ru7-a1-m1-cA_7ru7-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600