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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
SEFAALTKELNACREQLLEKEEEISELKAERNNTRLLLEHLEALVSRHERSLRMT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7d2h-a1-m1-cD 60 55 1.0000 0.9167 1.0000 1.58e-31 7d2h-a1-m1-cB_7d2h-a1-m1-cD, 7d2h-a1-m1-cC_7d2h-a1-m1-cD
2 7d2h-a1-m1-cC 56 55 1.0000 0.9821 1.0000 2.22e-31 7d2h-a1-m1-cB_7d2h-a1-m1-cC, 7d2h-a1-m1-cC_7d2h-a1-m1-cD
3 7d2h-a1-m1-cB 55 55 1.0000 1.0000 1.0000 2.34e-31 7d2h-a1-m1-cB_7d2h-a1-m1-cC, 7d2h-a1-m1-cB_7d2h-a1-m1-cD
4 7d2g-a2-m1-cD 49 45 0.8000 0.8980 0.9778 1.74e-21 7d2g-a2-m1-cC_7d2g-a2-m1-cD
5 7d2g-a2-m1-cC 46 44 0.7818 0.9348 0.9773 1.09e-20 7d2g-a2-m1-cC_7d2g-a2-m1-cD
6 6zbl-a1-m1-cD 498 30 0.2182 0.0241 0.4000 2.2 6zbl-a1-m1-cB_6zbl-a1-m1-cD
7 6zbl-a1-m1-cB 498 30 0.2182 0.0241 0.4000 2.2 6zbl-a1-m1-cB_6zbl-a1-m1-cD
8 7pt7-a1-m1-cF 617 40 0.2545 0.0227 0.3500 2.4 7pt7-a1-m1-c6_7pt7-a1-m1-cF
9 7pt7-a1-m1-c6 617 40 0.2545 0.0227 0.3500 2.4 7pt7-a1-m1-c6_7pt7-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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