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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
SEIELVFRPHPTLMEKAQTRYIKTSGNATVDHLSKYLAVRLALEELTASEKQYTIYIATA
SGQFTVLNGSFSLELVSEKYWKVNKPMELYYA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3h8h-a4-m3-cA 92 92 1.0000 1.0000 1.0000 2.00e-64 3h8h-a4-m1-cA_3h8h-a4-m3-cA
2 3h8h-a4-m1-cA 92 92 1.0000 1.0000 1.0000 2.00e-64 3h8h-a4-m1-cA_3h8h-a4-m3-cA
3 3h8h-a3-m2-cA 92 92 1.0000 1.0000 1.0000 2.00e-64 3h8h-a3-m1-cA_3h8h-a3-m2-cA
4 3h8h-a3-m1-cA 92 92 1.0000 1.0000 1.0000 2.00e-64 3h8h-a3-m1-cA_3h8h-a3-m2-cA
5 3gs2-a1-m1-cC 108 105 0.9565 0.8148 0.8381 1.38e-56 3gs2-a1-m1-cC_3gs2-a1-m1-cA
6 3gs2-a1-m1-cA 109 105 0.9565 0.8073 0.8381 1.44e-56 3gs2-a1-m1-cC_3gs2-a1-m1-cA
7 3rk0-a1-m2-cA 209 50 0.1848 0.0813 0.3400 1.3 3rk0-a1-m1-cA_3rk0-a1-m2-cA
8 3rk0-a1-m1-cA 209 50 0.1848 0.0813 0.3400 1.3 3rk0-a1-m1-cA_3rk0-a1-m2-cA
9 4jhc-a1-m1-cA 192 53 0.1413 0.0677 0.2453 4.4 4jhc-a1-m1-cB_4jhc-a1-m1-cA
10 2x4g-a1-m2-cA 302 43 0.1739 0.0530 0.3721 6.2 2x4g-a1-m1-cA_2x4g-a1-m2-cA
11 2x4g-a1-m1-cA 302 43 0.1739 0.0530 0.3721 6.2 2x4g-a1-m1-cA_2x4g-a1-m2-cA
12 3b97-a2-m1-cD 431 40 0.1196 0.0255 0.2750 6.4 3b97-a2-m1-cD_3b97-a2-m1-cC
13 3b97-a2-m1-cC 433 40 0.1196 0.0254 0.2750 6.5 3b97-a2-m1-cD_3b97-a2-m1-cC
14 4jhc-a1-m1-cB 182 42 0.1304 0.0659 0.2857 8.4 4jhc-a1-m1-cB_4jhc-a1-m1-cA
15 4nkr-a1-m2-cA 148 31 0.0978 0.0608 0.2903 9.5 4nkr-a1-m1-cA_4nkr-a1-m2-cA
16 4nkr-a1-m1-cA 148 31 0.0978 0.0608 0.2903 9.5 4nkr-a1-m1-cA_4nkr-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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