Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=61)
SEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTK
K

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hvv-a1-m1-cA 67 61 1.0000 0.9104 1.0000 3.50e-39 1hvv-a1-m1-cD_1hvv-a1-m1-cA
2 1hvv-a1-m1-cC 66 61 1.0000 0.9242 1.0000 4.38e-39 1hvv-a1-m1-cD_1hvv-a1-m1-cC
3 1hvv-a1-m1-cB 62 61 1.0000 0.9839 1.0000 6.24e-39 1hvv-a1-m1-cD_1hvv-a1-m1-cB
4 1hvv-a1-m1-cD 61 61 1.0000 1.0000 1.0000 6.79e-39 1hvv-a1-m1-cD_1hvv-a1-m1-cA, 1hvv-a1-m1-cD_1hvv-a1-m1-cB, 1hvv-a1-m1-cD_1hvv-a1-m1-cC
5 4red-a3-m1-cA 327 39 0.2787 0.0520 0.4359 0.62 4red-a3-m1-cA_4red-a3-m2-cB
6 4red-a2-m1-cA 327 39 0.2787 0.0520 0.4359 0.62 4red-a2-m1-cA_4red-a2-m1-cB
7 4red-a3-m2-cB 332 39 0.2787 0.0512 0.4359 0.63 4red-a3-m1-cA_4red-a3-m2-cB
8 4red-a2-m1-cB 332 39 0.2787 0.0512 0.4359 0.63 4red-a2-m1-cA_4red-a2-m1-cB
9 4red-a1-m2-cB 332 39 0.2787 0.0512 0.4359 0.63 4red-a1-m1-cB_4red-a1-m2-cB
10 4red-a1-m1-cB 332 39 0.2787 0.0512 0.4359 0.63 4red-a1-m1-cB_4red-a1-m2-cB
11 2bzv-a1-m3-cA 146 30 0.1311 0.0548 0.2667 1.6 2bzv-a1-m2-cA_2bzv-a1-m3-cA
12 2bzv-a1-m2-cA 146 30 0.1311 0.0548 0.2667 1.6 2bzv-a1-m2-cA_2bzv-a1-m3-cA
13 6e4u-a2-m2-cA 365 39 0.2787 0.0466 0.4359 1.8 6e4u-a2-m1-cA_6e4u-a2-m2-cA
14 6e4u-a2-m1-cA 365 39 0.2787 0.0466 0.4359 1.8 6e4u-a2-m1-cA_6e4u-a2-m2-cA
15 5iq4-a1-m1-cB 445 28 0.1475 0.0202 0.3214 5.9 5iq4-a1-m1-cA_5iq4-a1-m1-cB
16 5iq4-a1-m1-cA 445 28 0.1475 0.0202 0.3214 5.9 5iq4-a1-m1-cA_5iq4-a1-m1-cB
17 4wpc-a1-m1-cA 283 54 0.2459 0.0530 0.2778 6.1 4wpc-a1-m1-cA_4wpc-a1-m1-cB
18 4wpc-a1-m1-cB 288 54 0.2459 0.0521 0.2778 6.7 4wpc-a1-m1-cA_4wpc-a1-m1-cB
19 5j0j-a1-m1-cC 71 38 0.1639 0.1408 0.2632 7.1 5j0j-a1-m1-cB_5j0j-a1-m1-cC
20 3lv0-a1-m1-cB 254 43 0.1967 0.0472 0.2791 7.4 3lv0-a1-m1-cB_3lv0-a1-m1-cA
21 3lv0-a1-m1-cA 258 43 0.1967 0.0465 0.2791 8.3 3lv0-a1-m1-cB_3lv0-a1-m1-cA
22 5j0j-a1-m1-cB 69 33 0.1475 0.1304 0.2727 8.6 5j0j-a1-m1-cB_5j0j-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600