Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
SEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKS
LHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6cdb-a3-m3-cA 97 97 1.0000 1.0000 1.0000 9.83e-67 6cdb-a3-m4-cB_6cdb-a3-m3-cA
2 6cdb-a3-m4-cB 95 95 0.9794 1.0000 1.0000 2.55e-65 6cdb-a3-m2-cB_6cdb-a3-m4-cB, 6cdb-a3-m4-cB_6cdb-a3-m3-cA
3 6cdb-a3-m2-cB 95 95 0.9794 1.0000 1.0000 2.55e-65 6cdb-a3-m2-cB_6cdb-a3-m4-cB
4 1r1v-a3-m2-cB 96 94 0.9588 0.9688 0.9894 2.78e-64 1r1v-a3-m2-cA_1r1v-a3-m2-cB
5 2kjb-a1-m1-cB 95 94 0.9588 0.9789 0.9894 3.18e-64 2kjb-a1-m1-cA_2kjb-a1-m1-cB
6 2kjb-a1-m1-cA 95 94 0.9588 0.9789 0.9894 3.18e-64 2kjb-a1-m1-cA_2kjb-a1-m1-cB
7 1r1v-a3-m2-cA 95 94 0.9588 0.9789 0.9894 3.18e-64 1r1v-a3-m2-cA_1r1v-a3-m2-cB
8 2lkp-a1-m1-cB 119 95 0.3402 0.2773 0.3474 2.44e-15 2lkp-a1-m1-cA_2lkp-a1-m1-cB
9 2lkp-a1-m1-cA 119 95 0.3402 0.2773 0.3474 2.44e-15 2lkp-a1-m1-cA_2lkp-a1-m1-cB
10 6jmi-a1-m1-cA 100 79 0.3402 0.3300 0.4177 2.43e-12 6jmi-a1-m1-cD_6jmi-a1-m1-cA
11 1r23-a1-m1-cB 97 90 0.3402 0.3402 0.3667 1.58e-11 1r23-a1-m1-cB_1r23-a1-m1-cA
12 1r23-a1-m1-cA 104 90 0.3402 0.3173 0.3667 1.75e-11 1r23-a1-m1-cB_1r23-a1-m1-cA
13 4ooi-a1-m1-cA 95 74 0.2577 0.2632 0.3378 6.22e-09 4ooi-a1-m1-cA_4ooi-a1-m1-cB
14 4ooi-a1-m1-cB 96 74 0.2577 0.2604 0.3378 6.78e-09 4ooi-a1-m1-cA_4ooi-a1-m1-cB
15 6o8l-a1-m2-cA 92 74 0.2680 0.2826 0.3514 1.99e-08 6o8l-a1-m1-cA_6o8l-a1-m2-cA
16 6o8l-a1-m1-cA 92 74 0.2680 0.2826 0.3514 1.99e-08 6o8l-a1-m1-cA_6o8l-a1-m2-cA
17 2jsc-a1-m1-cB 97 81 0.2680 0.2680 0.3210 2.21e-08 2jsc-a1-m1-cA_2jsc-a1-m1-cB
18 2jsc-a1-m1-cA 96 81 0.2680 0.2708 0.3210 2.29e-08 2jsc-a1-m1-cA_2jsc-a1-m1-cB
19 7p6f-a3-m3-cDDD 97 74 0.2268 0.2268 0.2973 3.13e-07 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
20 7p6f-a3-m1-cDDD 97 74 0.2268 0.2268 0.2973 3.13e-07 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
21 3gw2-a1-m2-cA 92 80 0.2784 0.2935 0.3375 3.02e-05 3gw2-a1-m1-cA_3gw2-a1-m2-cA
22 3gw2-a1-m1-cA 92 80 0.2784 0.2935 0.3375 3.02e-05 3gw2-a1-m1-cA_3gw2-a1-m2-cA
23 4omz-a2-m1-cC 100 68 0.2165 0.2100 0.3088 4.04e-05 4omz-a2-m1-cD_4omz-a2-m1-cC
24 4omz-a2-m1-cD 98 68 0.2165 0.2143 0.3088 4.29e-05 4omz-a2-m1-cD_4omz-a2-m1-cC
25 6j0e-a1-m1-cB 125 78 0.2165 0.1680 0.2692 1.50e-04 6j0e-a1-m1-cA_6j0e-a1-m1-cB
26 6j0e-a1-m1-cA 124 78 0.2165 0.1694 0.2692 1.57e-04 6j0e-a1-m1-cA_6j0e-a1-m1-cB
27 6jmi-a1-m1-cD 83 37 0.1959 0.2289 0.5135 5.94e-04 6jmi-a1-m1-cD_6jmi-a1-m1-cA
28 3jth-a1-m1-cB 88 49 0.1856 0.2045 0.3673 0.004 3jth-a1-m1-cB_3jth-a1-m1-cA
29 3jth-a1-m1-cA 92 49 0.1856 0.1957 0.3673 0.005 3jth-a1-m1-cB_3jth-a1-m1-cA
30 2p4w-a1-m1-cA 197 59 0.1649 0.0812 0.2712 0.35 2p4w-a1-m1-cA_2p4w-a1-m1-cB
31 2p4w-a1-m1-cB 198 59 0.1649 0.0808 0.2712 0.36 2p4w-a1-m1-cA_2p4w-a1-m1-cB
32 2zkz-a1-m1-cB 82 82 0.2680 0.3171 0.3171 0.89 2zkz-a1-m1-cA_2zkz-a1-m1-cB
33 2zkz-a1-m1-cA 82 82 0.2680 0.3171 0.3171 0.89 2zkz-a1-m1-cA_2zkz-a1-m1-cB
34 7sr6-a2-m1-cG 432 24 0.1237 0.0278 0.5000 8.7 7sr6-a2-m1-cG_7sr6-a2-m1-cF
35 7sr6-a2-m1-cF 566 24 0.1237 0.0212 0.5000 9.3 7sr6-a2-m1-cG_7sr6-a2-m1-cF

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600