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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
SEIQQLKTSVAVMEANLGMMKILDPGCANVSSLSDLRAVAKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7yot-a1-m1-cC 42 42 1.0000 1.0000 1.0000 1.83e-24 7yot-a1-m1-cC_7yot-a1-m1-cD
2 7you-a1-m1-cC 47 42 1.0000 0.8936 1.0000 2.03e-24 7you-a1-m1-cB_7you-a1-m1-cC
3 7yov-a1-m1-cD 76 42 1.0000 0.5526 1.0000 2.08e-24 7yov-a1-m1-cD_7yov-a1-m1-cE
4 7you-a1-m1-cD 54 42 1.0000 0.7778 1.0000 2.21e-24 7you-a1-m1-cB_7you-a1-m1-cD
5 7yot-a1-m1-cD 51 42 1.0000 0.8235 1.0000 2.27e-24 7yot-a1-m1-cC_7yot-a1-m1-cD
6 7yov-a1-m1-cE 158 42 1.0000 0.2658 1.0000 1.54e-23 7yov-a1-m1-cD_7yov-a1-m1-cE
7 7you-a1-m1-cB 41 38 0.9048 0.9268 1.0000 6.33e-22 7you-a1-m1-cB_7you-a1-m1-cC, 7you-a1-m1-cB_7you-a1-m1-cD
8 1sh5-a1-m1-cB 232 25 0.1905 0.0345 0.3200 4.9 1sh5-a1-m1-cA_1sh5-a1-m1-cB
9 1sh5-a1-m1-cA 232 25 0.1905 0.0345 0.3200 4.9 1sh5-a1-m1-cA_1sh5-a1-m1-cB
10 7cpy-a1-m1-cB 2262 11 0.1905 0.0035 0.7273 9.6 7cpy-a1-m1-cA_7cpy-a1-m1-cB
11 7cpy-a1-m1-cA 2262 11 0.1905 0.0035 0.7273 9.6 7cpy-a1-m1-cA_7cpy-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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