Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
SEISPEQRTAFEAAVFRRLLEHLRERSDVQNIDLNLAGFCRNCLSNWYREAAEASGVPSK
EESREIVYGPYEEWRT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2o35-a1-m2-cB 92 76 1.0000 0.8261 1.0000 4.01e-52 2o35-a1-m1-cA_2o35-a1-m2-cB, 2o35-a1-m1-cB_2o35-a1-m2-cB, 2o35-a1-m2-cA_2o35-a1-m2-cB
2 2o35-a1-m1-cB 92 76 1.0000 0.8261 1.0000 4.01e-52 2o35-a1-m1-cB_2o35-a1-m2-cB
3 2o35-a1-m2-cA 76 76 1.0000 1.0000 1.0000 6.69e-52 2o35-a1-m1-cA_2o35-a1-m2-cA, 2o35-a1-m2-cA_2o35-a1-m2-cB
4 2o35-a1-m1-cA 76 76 1.0000 1.0000 1.0000 6.69e-52 2o35-a1-m1-cA_2o35-a1-m2-cA, 2o35-a1-m1-cA_2o35-a1-m2-cB
5 3fyb-a1-m1-cA 93 65 0.4737 0.3871 0.5538 2.69e-20 3fyb-a1-m1-cB_3fyb-a1-m1-cA
6 3fyb-a1-m1-cB 83 65 0.4737 0.4337 0.5538 2.74e-20 3fyb-a1-m1-cB_3fyb-a1-m1-cA
7 3p91-a1-m3-cA 245 35 0.1842 0.0571 0.4000 0.011 3p91-a1-m2-cA_3p91-a1-m3-cA
8 3p91-a1-m2-cA 245 35 0.1842 0.0571 0.4000 0.011 3p91-a1-m2-cA_3p91-a1-m3-cA
9 8epz-a1-m1-cB 567 40 0.1974 0.0265 0.3750 0.37 8epz-a1-m1-cB_8epz-a1-m1-cA
10 8epz-a1-m1-cA 568 40 0.1974 0.0264 0.3750 0.37 8epz-a1-m1-cB_8epz-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600