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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
SELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEM
EQQNQEYKILLDVKTRLEQEIATYRRLLEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3tnu-a1-m2-cA 90 90 1.0000 1.0000 1.0000 4.24e-58 3tnu-a1-m1-cA_3tnu-a1-m2-cA
2 3tnu-a1-m1-cA 90 90 1.0000 1.0000 1.0000 4.24e-58 3tnu-a1-m1-cA_3tnu-a1-m2-cA
3 4zry-a1-m2-cA 110 90 0.6667 0.5455 0.6667 1.67e-33 4zry-a1-m1-cA_4zry-a1-m2-cA
4 4zry-a1-m1-cA 110 90 0.6667 0.5455 0.6667 1.67e-33 4zry-a1-m1-cA_4zry-a1-m2-cA
5 1gk4-a3-m1-cE 70 68 0.3000 0.3857 0.3971 2.33e-10 1gk4-a3-m1-cE_1gk4-a3-m1-cF
6 1gk4-a3-m1-cF 74 68 0.3000 0.3649 0.3971 2.73e-10 1gk4-a3-m1-cE_1gk4-a3-m1-cF
7 3tyy-a1-m1-cB 71 46 0.2444 0.3099 0.4783 1.81e-07 3tyy-a1-m1-cB_3tyy-a1-m1-cA
8 3tyy-a1-m1-cA 75 46 0.2444 0.2933 0.4783 2.20e-07 3tyy-a1-m1-cB_3tyy-a1-m1-cA
9 3v4q-a2-m2-cA 74 46 0.2333 0.2838 0.4565 2.94e-07 3v4q-a2-m1-cA_3v4q-a2-m2-cA
10 3v4q-a2-m1-cA 74 46 0.2333 0.2838 0.4565 2.94e-07 3v4q-a2-m1-cA_3v4q-a2-m2-cA
11 1gk6-a1-m1-cB 52 21 0.1667 0.2885 0.7143 0.006 1gk6-a1-m1-cB_1gk6-a1-m1-cA
12 1gk6-a1-m1-cA 55 21 0.1667 0.2727 0.7143 0.006 1gk6-a1-m1-cB_1gk6-a1-m1-cA
13 2xv5-a1-m1-cB 53 29 0.1889 0.3208 0.5862 0.060 2xv5-a1-m1-cA_2xv5-a1-m1-cB
14 2xv5-a1-m1-cA 53 29 0.1889 0.3208 0.5862 0.060 2xv5-a1-m1-cA_2xv5-a1-m1-cB
15 7p5m-a1-m1-cB 394 51 0.1778 0.0406 0.3137 1.6 7p5m-a1-m1-cA_7p5m-a1-m1-cB
16 7p5m-a1-m1-cA 394 51 0.1778 0.0406 0.3137 1.6 7p5m-a1-m1-cA_7p5m-a1-m1-cB
17 7kog-a1-m1-cB 1077 66 0.1889 0.0158 0.2576 8.9 7kog-a1-m1-cA_7kog-a1-m1-cB
18 7kog-a1-m1-cA 1077 66 0.1889 0.0158 0.2576 8.9 7kog-a1-m1-cA_7kog-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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