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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
SEQVWHVLDVEPSSPAALAGLRPYTDYVVGSDQSEDFFTLIESHEGKPLKLMVYNSKSDS
CREVTVTPNAAWGGEGSLGCGIGYGYLHRIPT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6g8w-a1-m1-cA 92 92 1.0000 1.0000 1.0000 1.19e-65 6g8w-a1-m1-cB_6g8w-a1-m1-cA
2 6g8w-a1-m1-cB 87 91 0.9457 1.0000 0.9560 1.46e-59 6g8w-a1-m1-cB_6g8w-a1-m1-cA
3 3ddh-a1-m1-cB 217 60 0.2283 0.0968 0.3500 0.48 3ddh-a1-m1-cB_3ddh-a1-m1-cA
4 3ddh-a1-m1-cA 222 60 0.2283 0.0946 0.3500 0.50 3ddh-a1-m1-cB_3ddh-a1-m1-cA
5 2eb0-a1-m1-cA 304 49 0.1957 0.0592 0.3673 3.7 2eb0-a1-m1-cA_2eb0-a1-m1-cB
6 2eb0-a1-m1-cB 307 49 0.1957 0.0586 0.3673 3.7 2eb0-a1-m1-cA_2eb0-a1-m1-cB
7 3nem-a1-m1-cB 438 43 0.1304 0.0274 0.2791 4.0 3nem-a1-m1-cA_3nem-a1-m1-cB
8 3nem-a1-m1-cA 438 43 0.1304 0.0274 0.2791 4.0 3nem-a1-m1-cA_3nem-a1-m1-cB
9 2ego-a1-m1-cA 88 22 0.1413 0.1477 0.5909 4.3 2ego-a1-m1-cA_2ego-a1-m1-cB
10 4k7e-a2-m2-cA 151 62 0.1957 0.1192 0.2903 4.5 4k7e-a2-m1-cA_4k7e-a2-m2-cA
11 4k7e-a2-m1-cA 151 62 0.1957 0.1192 0.2903 4.5 4k7e-a2-m1-cA_4k7e-a2-m2-cA
12 2ego-a1-m1-cB 90 22 0.1413 0.1444 0.5909 4.5 2ego-a1-m1-cA_2ego-a1-m1-cB
13 4l8n-a1-m2-cA 440 18 0.1087 0.0227 0.5556 8.1 4l8n-a1-m1-cA_4l8n-a1-m2-cA
14 4l8n-a1-m1-cA 440 18 0.1087 0.0227 0.5556 8.1 4l8n-a1-m1-cA_4l8n-a1-m2-cA
15 3r68-a2-m2-cA 85 23 0.1304 0.1412 0.5217 9.7 3r68-a2-m1-cA_3r68-a2-m2-cA
16 3r68-a2-m1-cA 85 23 0.1304 0.1412 0.5217 9.7 3r68-a2-m1-cA_3r68-a2-m2-cA
17 1z5h-a4-m4-cB 780 32 0.1304 0.0154 0.3750 9.7 1z5h-a4-m1-cA_1z5h-a4-m4-cB
18 1z5h-a4-m1-cA 780 32 0.1304 0.0154 0.3750 9.7 1z5h-a4-m1-cA_1z5h-a4-m4-cB
19 1z5h-a3-m2-cA 780 32 0.1304 0.0154 0.3750 9.7 1z5h-a3-m1-cA_1z5h-a3-m2-cA
20 1z5h-a3-m1-cA 780 32 0.1304 0.0154 0.3750 9.7 1z5h-a3-m1-cA_1z5h-a3-m2-cA
21 3r69-a3-m1-cB 87 23 0.1304 0.1379 0.5217 9.9 3r69-a3-m1-cA_3r69-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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