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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
SERLAFKMKLNKGQKQAYKERHDQLWPELKQLLKDNGVSEYSIFIDEETNTLFAFQKVSG
DLANNEIVKKWWDFMADIMQVNPDNSPVSIPLEEVFYME

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6hhn-a1-m2-cA 99 99 1.0000 1.0000 1.0000 2.20e-70 6hhn-a1-m1-cA_6hhn-a1-m2-cA
2 6hhn-a1-m1-cA 99 99 1.0000 1.0000 1.0000 2.20e-70 6hhn-a1-m1-cA_6hhn-a1-m2-cA
3 1x8d-a2-m1-cD 104 101 0.4141 0.3942 0.4059 5.33e-28 1x8d-a2-m1-cC_1x8d-a2-m1-cD
4 1x8d-a2-m1-cC 104 101 0.4141 0.3942 0.4059 5.33e-28 1x8d-a2-m1-cC_1x8d-a2-m1-cD
5 2qlw-a2-m2-cB 100 99 0.4747 0.4700 0.4747 1.03e-20 2qlw-a2-m2-cA_2qlw-a2-m2-cB
6 2qlw-a2-m2-cA 100 99 0.4747 0.4700 0.4747 1.03e-20 2qlw-a2-m1-cA_2qlw-a2-m2-cA, 2qlw-a2-m2-cA_2qlw-a2-m2-cB
7 2qlw-a2-m1-cA 100 99 0.4747 0.4700 0.4747 1.03e-20 2qlw-a2-m1-cA_2qlw-a2-m2-cA
8 7byw-a1-m1-cB 108 108 0.2626 0.2407 0.2407 2.46e-07 7byw-a1-m1-cA_7byw-a1-m1-cB
9 7byw-a1-m1-cA 108 108 0.2626 0.2407 0.2407 2.46e-07 7byw-a1-m1-cA_7byw-a1-m1-cB
10 7o21-a1-m1-cA 276 63 0.1818 0.0652 0.2857 1.3 7o21-a1-m1-cB_7o21-a1-m1-cA
11 6mrv-a1-m1-cB 522 37 0.1212 0.0230 0.3243 1.5 6mrv-a1-m1-cA_6mrv-a1-m1-cB
12 6mrv-a1-m1-cA 522 37 0.1212 0.0230 0.3243 1.5 6mrv-a1-m1-cA_6mrv-a1-m1-cB
13 4fj6-a2-m1-cD 504 38 0.1414 0.0278 0.3684 2.4 4fj6-a2-m1-cC_4fj6-a2-m1-cD
14 4fj6-a2-m1-cC 502 38 0.1414 0.0279 0.3684 2.5 4fj6-a2-m1-cC_4fj6-a2-m1-cD
15 7wjp-a1-m2-cA 98 57 0.1313 0.1327 0.2281 3.8 7wjp-a1-m1-cA_7wjp-a1-m2-cA
16 7wjp-a1-m1-cA 98 57 0.1313 0.1327 0.2281 3.8 7wjp-a1-m1-cA_7wjp-a1-m2-cA
17 7qyp-a1-m1-cB 519 51 0.1515 0.0289 0.2941 4.8 7qyp-a1-m1-cA_7qyp-a1-m1-cB
18 7qyp-a1-m1-cA 519 51 0.1515 0.0289 0.2941 4.8 7qyp-a1-m1-cA_7qyp-a1-m1-cB
19 7o21-a1-m1-cB 268 56 0.1717 0.0634 0.3036 7.2 7o21-a1-m1-cB_7o21-a1-m1-cA
20 1i7q-a1-m1-cC 517 40 0.1515 0.0290 0.3750 8.2 1i7q-a1-m1-cA_1i7q-a1-m1-cC
21 1i7q-a1-m1-cA 517 40 0.1515 0.0290 0.3750 8.2 1i7q-a1-m1-cA_1i7q-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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