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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
SETYINHPTWGLLYRICMVDESQDLFTTLYAQRLFFLVGNDIKAIKFQPIGRTEARMLLE
NRLRNLRRNGQSQEYDQLQSVFQRTF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3n5b-a1-m3-cB 86 86 1.0000 1.0000 1.0000 7.82e-61 3n5b-a1-m2-cB_3n5b-a1-m3-cB
2 3n5b-a1-m2-cB 86 86 1.0000 1.0000 1.0000 7.82e-61 3n5b-a1-m2-cB_3n5b-a1-m3-cB
3 2xg8-a1-m2-cE 87 86 0.6395 0.6322 0.6395 1.24e-37 2xg8-a1-m2-cD_2xg8-a1-m2-cE
4 2xg8-a1-m2-cD 87 86 0.6395 0.6322 0.6395 1.24e-37 2xg8-a1-m2-cD_2xg8-a1-m2-cE
5 2xg8-a1-m2-cF 78 61 0.4419 0.4872 0.6230 4.97e-23 2xg8-a1-m1-cF_2xg8-a1-m2-cF
6 2xg8-a1-m1-cF 78 61 0.4419 0.4872 0.6230 4.97e-23 2xg8-a1-m1-cF_2xg8-a1-m2-cF
7 3nl2-a1-m1-cE 503 25 0.1628 0.0278 0.5600 0.057 3nl2-a1-m1-cD_3nl2-a1-m1-cE, 3nl2-a1-m1-cE_3nl2-a1-m1-cA
8 1dlj-a1-m2-cA 402 81 0.2326 0.0498 0.2469 5.1 1dlj-a1-m1-cA_1dlj-a1-m2-cA
9 1dlj-a1-m1-cA 402 81 0.2326 0.0498 0.2469 5.1 1dlj-a1-m1-cA_1dlj-a1-m2-cA
10 4os0-a3-m2-cB 163 25 0.1047 0.0552 0.3600 5.5 4os0-a3-m1-cA_4os0-a3-m2-cB
11 4os0-a3-m1-cA 163 25 0.1047 0.0552 0.3600 5.5 4os0-a3-m1-cA_4os0-a3-m2-cB
12 4orx-a3-m1-cB 159 25 0.1047 0.0566 0.3600 6.4 4orx-a3-m1-cA_4orx-a3-m1-cB
13 4orx-a3-m1-cA 159 25 0.1047 0.0566 0.3600 6.4 4orx-a3-m1-cA_4orx-a3-m1-cB
14 3bws-a3-m1-cB 402 66 0.2093 0.0448 0.2727 7.2 3bws-a3-m1-cA_3bws-a3-m1-cB
15 3bws-a3-m1-cA 402 66 0.2093 0.0448 0.2727 7.2 3bws-a3-m1-cA_3bws-a3-m1-cB
16 8iou-a1-m1-cC 986 46 0.1628 0.0142 0.3043 7.7 8iou-a1-m1-cB_8iou-a1-m1-cC
17 6d1p-a1-m1-cA 781 55 0.2093 0.0230 0.3273 8.0 6d1p-a1-m1-cB_6d1p-a1-m1-cA
18 6d1p-a1-m1-cB 779 55 0.2093 0.0231 0.3273 8.4 6d1p-a1-m1-cB_6d1p-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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