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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
SEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQR
KMA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7d2e-a1-m1-cD 63 63 1.0000 1.0000 1.0000 4.07e-37 7d2e-a1-m1-cA_7d2e-a1-m1-cD, 7d2e-a1-m1-cC_7d2e-a1-m1-cD
2 7d2e-a1-m1-cA 62 61 0.9683 0.9839 1.0000 1.89e-35 7d2e-a1-m1-cA_7d2e-a1-m1-cD, 7d2e-a1-m1-cC_7d2e-a1-m1-cA
3 7d2e-a1-m1-cC 59 59 0.9365 1.0000 1.0000 5.63e-34 7d2e-a1-m1-cC_7d2e-a1-m1-cA, 7d2e-a1-m1-cC_7d2e-a1-m1-cD
4 6xye-a1-m1-cF 357 35 0.2063 0.0364 0.3714 1.8 6xye-a1-m1-cD_6xye-a1-m1-cF
5 6xye-a1-m1-cD 357 35 0.2063 0.0364 0.3714 1.8 6xye-a1-m1-cD_6xye-a1-m1-cF
6 6ys4-a3-m1-cF 100 55 0.3492 0.2200 0.4000 1.9 6ys4-a3-m1-cF_6ys4-a3-m1-cE
7 6ys4-a3-m1-cE 102 55 0.3492 0.2157 0.4000 2.2 6ys4-a3-m1-cF_6ys4-a3-m1-cE
8 7q1q-a1-m1-cB 30 26 0.1587 0.3333 0.3846 3.1 7q1q-a1-m1-cA_7q1q-a1-m1-cB
9 7q1q-a1-m1-cA 30 26 0.1587 0.3333 0.3846 3.1 7q1q-a1-m1-cA_7q1q-a1-m1-cB
10 7bjs-a1-m1-cB 62 25 0.1905 0.1935 0.4800 5.5 7bjs-a1-m1-cB_7bjs-a1-m1-cA
11 7bjs-a1-m1-cA 69 25 0.1905 0.1739 0.4800 5.6 7bjs-a1-m1-cB_7bjs-a1-m1-cA
12 5yzc-a1-m3-cB 367 35 0.1746 0.0300 0.3143 7.4 5yzc-a1-m2-cB_5yzc-a1-m3-cB
13 5yzc-a1-m2-cB 367 35 0.1746 0.0300 0.3143 7.4 5yzc-a1-m2-cB_5yzc-a1-m3-cB
14 7q1r-a1-m1-cB 30 17 0.1587 0.3333 0.5882 8.1 7q1r-a1-m1-cA_7q1r-a1-m1-cB
15 7q1r-a1-m1-cA 30 17 0.1587 0.3333 0.5882 8.1 7q1r-a1-m1-cA_7q1r-a1-m1-cB
16 4dzn-a1-m1-cB 31 20 0.1587 0.3226 0.5000 8.4 4dzn-a1-m1-cA_4dzn-a1-m1-cB
17 4dzn-a1-m1-cA 31 20 0.1587 0.3226 0.5000 8.4 4dzn-a1-m1-cA_4dzn-a1-m1-cB
18 5h80-a1-m1-cA 430 57 0.2222 0.0326 0.2456 8.4 5h80-a1-m1-cB_5h80-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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