Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
SFIDIEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVM
RDTKGNYFLWTEKFPSLNKLVDYYRTTSISKQKQVFLRD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1r1s-a5-m1-cE 99 99 1.0000 1.0000 1.0000 6.07e-71 1r1s-a5-m1-cA_1r1s-a5-m1-cE
2 1r1s-a5-m1-cA 96 96 0.9697 1.0000 1.0000 6.63e-69 1r1s-a5-m1-cA_1r1s-a5-m1-cE
3 2ci8-a1-m2-cA 98 82 0.3131 0.3163 0.3780 8.81e-12 2ci8-a1-m1-cA_2ci8-a1-m2-cA
4 2ci8-a1-m1-cA 98 82 0.3131 0.3163 0.3780 8.81e-12 2ci8-a1-m1-cA_2ci8-a1-m2-cA
5 1opl-a3-m2-cA 451 85 0.3131 0.0687 0.3647 1.07e-11 1opl-a3-m1-cA_1opl-a3-m2-cA
6 1opl-a3-m1-cA 451 85 0.3131 0.0687 0.3647 1.07e-11 1opl-a3-m1-cA_1opl-a3-m2-cA
7 3ps5-a2-m2-cA 529 91 0.3636 0.0681 0.3956 1.37e-11 3ps5-a2-m1-cA_3ps5-a2-m2-cA
8 3ps5-a2-m2-cA 529 98 0.3333 0.0624 0.3367 4.96e-08 3ps5-a2-m1-cA_3ps5-a2-m2-cA
9 3ps5-a2-m1-cA 529 91 0.3636 0.0681 0.3956 1.37e-11 3ps5-a2-m1-cA_3ps5-a2-m2-cA
10 3ps5-a2-m1-cA 529 98 0.3333 0.0624 0.3367 4.96e-08 3ps5-a2-m1-cA_3ps5-a2-m2-cA
11 1k9a-a7-m1-cC 438 79 0.2727 0.0616 0.3418 1.40e-11 1k9a-a7-m2-cD_1k9a-a7-m1-cC
12 4u5w-a1-m1-cB 163 89 0.3434 0.2086 0.3820 1.79e-11 4u5w-a1-m1-cD_4u5w-a1-m1-cB
13 2hck-a1-m1-cB 437 89 0.3434 0.0778 0.3820 1.03e-10 2hck-a1-m1-cA_2hck-a1-m1-cB
14 2hck-a1-m1-cA 437 89 0.3434 0.0778 0.3820 1.03e-10 2hck-a1-m1-cA_2hck-a1-m1-cB
15 1bhh-a1-m1-cA 104 90 0.3535 0.3365 0.3889 3.47e-10 1bhh-a1-m1-cB_1bhh-a1-m1-cA
16 1bhh-a1-m1-cB 103 90 0.3535 0.3398 0.3889 3.70e-10 1bhh-a1-m1-cB_1bhh-a1-m1-cA
17 1cwe-a1-m1-cC 98 87 0.3333 0.3367 0.3793 4.07e-10 1cwe-a1-m1-cA_1cwe-a1-m1-cC
18 1cwe-a1-m1-cA 98 87 0.3333 0.3367 0.3793 4.07e-10 1cwe-a1-m1-cA_1cwe-a1-m1-cC
19 4u17-a2-m2-cB 102 84 0.3030 0.2941 0.3571 4.26e-10 4u17-a2-m1-cB_4u17-a2-m2-cB
20 4u17-a2-m1-cB 102 84 0.3030 0.2941 0.3571 4.26e-10 4u17-a2-m1-cB_4u17-a2-m2-cB
21 1x27-a1-m1-cF 163 92 0.3434 0.2086 0.3696 1.03e-09 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
22 1x27-a1-m1-cD 163 92 0.3434 0.2086 0.3696 1.03e-09 1x27-a1-m1-cD_1x27-a1-m1-cF
23 1x27-a1-m1-cA 163 92 0.3434 0.2086 0.3696 1.03e-09 1x27-a1-m1-cA_1x27-a1-m1-cF
24 1f1w-a3-m3-cA 104 84 0.2626 0.2500 0.3095 1.04e-09 1f1w-a3-m1-cA_1f1w-a3-m3-cA
25 1f1w-a3-m1-cA 104 84 0.2626 0.2500 0.3095 1.04e-09 1f1w-a3-m1-cA_1f1w-a3-m3-cA
26 1f1w-a2-m2-cA 104 84 0.2626 0.2500 0.3095 1.04e-09 1f1w-a2-m1-cA_1f1w-a2-m2-cA
27 1f1w-a2-m1-cA 104 84 0.2626 0.2500 0.3095 1.04e-09 1f1w-a2-m1-cA_1f1w-a2-m2-cA
28 2aug-a2-m3-cB 108 83 0.2626 0.2407 0.3133 2.61e-08 2aug-a2-m1-cB_2aug-a2-m3-cB
29 2aug-a2-m1-cB 108 83 0.2626 0.2407 0.3133 2.61e-08 2aug-a2-m1-cB_2aug-a2-m3-cB
30 4u5w-a1-m1-cD 160 89 0.3333 0.2062 0.3708 5.32e-08 4u5w-a1-m1-cD_4u5w-a1-m1-cB
31 1nrv-a1-m1-cB 100 79 0.2323 0.2300 0.2911 1.82e-07 1nrv-a1-m1-cA_1nrv-a1-m1-cB
32 1nrv-a1-m1-cA 100 79 0.2323 0.2300 0.2911 1.82e-07 1nrv-a1-m1-cA_1nrv-a1-m1-cB
33 1a81-a1-m1-cI 254 78 0.2525 0.0984 0.3205 1.28e-06 1a81-a1-m1-cK_1a81-a1-m1-cI
34 1a81-a1-m1-cI 254 62 0.1818 0.0709 0.2903 2.91e-04 1a81-a1-m1-cK_1a81-a1-m1-cI
35 1a81-a1-m1-cK 220 78 0.2525 0.1136 0.3205 1.33e-06 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
36 1a81-a1-m1-cK 220 62 0.1818 0.0818 0.2903 2.89e-04 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
37 1a81-a1-m1-cG 220 78 0.2525 0.1136 0.3205 1.33e-06 1a81-a1-m1-cG_1a81-a1-m1-cK
38 1a81-a1-m1-cG 220 62 0.1818 0.0818 0.2903 2.89e-04 1a81-a1-m1-cG_1a81-a1-m1-cK
39 1k9a-a7-m2-cD 433 79 0.2323 0.0531 0.2911 1.99e-06 1k9a-a7-m2-cD_1k9a-a7-m1-cC
40 4wwq-a1-m1-cA 112 83 0.2222 0.1964 0.2651 7.09e-06 4wwq-a1-m1-cA_4wwq-a1-m1-cB
41 2qms-a2-m2-cD 113 83 0.2222 0.1947 0.2651 7.28e-06 2qms-a2-m1-cB_2qms-a2-m2-cD
42 2qms-a2-m1-cB 113 83 0.2222 0.1947 0.2651 7.28e-06 2qms-a2-m1-cB_2qms-a2-m2-cD
43 3us4-a2-m2-cA 94 51 0.1818 0.1915 0.3529 7.31e-06 3us4-a2-m1-cA_3us4-a2-m2-cA
44 3us4-a2-m1-cA 94 51 0.1818 0.1915 0.3529 7.31e-06 3us4-a2-m1-cA_3us4-a2-m2-cA
45 4wwq-a1-m1-cB 119 83 0.2222 0.1849 0.2651 8.81e-06 4wwq-a1-m1-cA_4wwq-a1-m1-cB
46 3s9k-a2-m2-cA 114 94 0.2929 0.2544 0.3085 2.25e-04 3s9k-a2-m1-cA_3s9k-a2-m2-cA
47 3s9k-a2-m1-cA 114 94 0.2929 0.2544 0.3085 2.25e-04 3s9k-a2-m1-cA_3s9k-a2-m2-cA
48 1rqq-a1-m1-cD 83 53 0.1616 0.1928 0.3019 2.80e-04 1rqq-a1-m1-cC_1rqq-a1-m1-cD
49 1rqq-a1-m1-cC 83 53 0.1616 0.1928 0.3019 2.80e-04 1rqq-a1-m1-cC_1rqq-a1-m1-cD
50 1rpy-a2-m2-cB 85 53 0.1616 0.1882 0.3019 3.78e-04 1rpy-a2-m1-cB_1rpy-a2-m2-cB
51 1rpy-a2-m1-cB 85 53 0.1616 0.1882 0.3019 3.78e-04 1rpy-a2-m1-cB_1rpy-a2-m2-cB
52 7mp3-a1-m1-cB 97 83 0.2121 0.2165 0.2530 0.003 7mp3-a1-m1-cB_7mp3-a1-m1-cA
53 4xi2-a1-m2-cA 421 86 0.2727 0.0641 0.3140 0.004 4xi2-a1-m1-cA_4xi2-a1-m2-cA
54 4xi2-a1-m1-cA 421 86 0.2727 0.0641 0.3140 0.004 4xi2-a1-m1-cA_4xi2-a1-m2-cA
55 7mp3-a1-m1-cA 102 83 0.2121 0.2059 0.2530 0.006 7mp3-a1-m1-cB_7mp3-a1-m1-cA
56 1uur-a1-m2-cA 460 48 0.1616 0.0348 0.3333 0.049 1uur-a1-m1-cA_1uur-a1-m2-cA
57 1uur-a1-m1-cA 460 48 0.1616 0.0348 0.3333 0.049 1uur-a1-m1-cA_1uur-a1-m2-cA
58 3pjp-a3-m2-cB 195 49 0.1616 0.0821 0.3265 7.3 3pjp-a3-m1-cA_3pjp-a3-m2-cB, 3pjp-a3-m2-cA_3pjp-a3-m2-cB
59 3pjp-a3-m2-cA 194 49 0.1616 0.0825 0.3265 7.5 3pjp-a3-m2-cA_3pjp-a3-m2-cB
60 3pjp-a3-m1-cA 194 49 0.1616 0.0825 0.3265 7.5 3pjp-a3-m1-cA_3pjp-a3-m2-cB
61 4qfw-a3-m1-cC 269 94 0.2323 0.0855 0.2447 9.2 4qfw-a3-m1-cD_4qfw-a3-m1-cC
62 4qfw-a3-m1-cD 263 94 0.2323 0.0875 0.2447 9.5 4qfw-a3-m1-cD_4qfw-a3-m1-cC
63 4qfw-a1-m1-cD 263 94 0.2323 0.0875 0.2447 9.5 4qfw-a1-m1-cD_4qfw-a1-m1-cB
64 4pwy-a1-m2-cA 250 28 0.1010 0.0400 0.3571 9.5 4pwy-a1-m1-cA_4pwy-a1-m2-cA
65 4pwy-a1-m1-cA 250 28 0.1010 0.0400 0.3571 9.5 4pwy-a1-m1-cA_4pwy-a1-m2-cA
66 4qfw-a1-m1-cB 265 94 0.2323 0.0868 0.2447 9.5 4qfw-a1-m1-cD_4qfw-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600