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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
SFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKVKAEAQIAKMEE
QRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6bie-a2-m4-cA 97 97 1.0000 1.0000 1.0000 1.26e-67 6bie-a2-m1-cA_6bie-a2-m4-cA
2 6bie-a2-m1-cA 97 97 1.0000 1.0000 1.0000 1.26e-67 6bie-a2-m1-cA_6bie-a2-m4-cA
3 6bie-a1-m2-cB 97 97 1.0000 1.0000 1.0000 1.26e-67 6bie-a1-m1-cA_6bie-a1-m2-cB
4 6bie-a1-m1-cA 97 97 1.0000 1.0000 1.0000 1.26e-67 6bie-a1-m1-cA_6bie-a1-m2-cB
5 5wo3-a1-m1-cA 90 96 0.9175 0.9889 0.9271 8.79e-58 5wo3-a1-m1-cB_5wo3-a1-m1-cA
6 5wo3-a1-m1-cB 87 94 0.8866 0.9885 0.9149 6.43e-55 5wo3-a1-m1-cB_5wo3-a1-m1-cA
7 3itf-a1-m1-cB 103 95 0.2887 0.2718 0.2947 5.99e-04 3itf-a1-m1-cA_3itf-a1-m1-cB
8 3itf-a1-m1-cA 103 95 0.2887 0.2718 0.2947 5.99e-04 3itf-a1-m1-cA_3itf-a1-m1-cB
9 8gxl-a1-m1-cB 122 88 0.2577 0.2049 0.2841 1.1 8gxl-a1-m1-cA_8gxl-a1-m1-cB
10 7az0-a1-m1-cAAA 312 38 0.1237 0.0385 0.3158 3.5 7az0-a1-m1-cBBB_7az0-a1-m1-cAAA
11 4gd9-a1-m1-cD 122 16 0.1031 0.0820 0.6250 3.7 4gd9-a1-m1-cD_4gd9-a1-m1-cB
12 5v4l-a5-m1-cC 467 50 0.1753 0.0364 0.3400 6.4 5v4l-a5-m1-cD_5v4l-a5-m1-cC
13 5v4l-a5-m1-cA 457 50 0.1753 0.0372 0.3400 6.6 5v4l-a5-m1-cD_5v4l-a5-m1-cA
14 2hwj-a3-m5-cB 186 38 0.1546 0.0806 0.3947 7.5 2hwj-a3-m1-cB_2hwj-a3-m5-cB
15 2hwj-a3-m1-cB 186 38 0.1546 0.0806 0.3947 7.5 2hwj-a3-m1-cB_2hwj-a3-m1-cD, 2hwj-a3-m1-cB_2hwj-a3-m5-cB
16 2hwj-a3-m4-cF 187 38 0.1546 0.0802 0.3947 7.5 2hwj-a3-m4-cE_2hwj-a3-m4-cF
17 2hwj-a3-m5-cA 193 38 0.1546 0.0777 0.3947 7.6 2hwj-a3-m5-cD_2hwj-a3-m5-cA
18 2hwj-a3-m4-cE 185 38 0.1546 0.0811 0.3947 7.7 2hwj-a3-m4-cE_2hwj-a3-m4-cF
19 2hwj-a3-m5-cD 190 38 0.1546 0.0789 0.3947 7.8 2hwj-a3-m5-cD_2hwj-a3-m5-cA
20 2hwj-a3-m1-cD 190 38 0.1546 0.0789 0.3947 7.8 2hwj-a3-m1-cB_2hwj-a3-m1-cD
21 2h5n-a2-m6-cA 132 22 0.1134 0.0833 0.5000 8.9 2h5n-a2-m1-cA_2h5n-a2-m6-cA, 2h5n-a2-m4-cB_2h5n-a2-m6-cA, 2h5n-a2-m5-cB_2h5n-a2-m6-cA, 2h5n-a2-m6-cC_2h5n-a2-m6-cA
22 2h5n-a2-m1-cA 132 22 0.1134 0.0833 0.5000 8.9 2h5n-a2-m1-cA_2h5n-a2-m6-cA
23 2h5n-a1-m1-cD 123 22 0.1134 0.0894 0.5000 9.7 2h5n-a1-m1-cD_2h5n-a1-m1-cC
24 2h5n-a2-m6-cC 124 22 0.1134 0.0887 0.5000 9.8 2h5n-a2-m6-cC_2h5n-a2-m6-cA
25 2h5n-a1-m1-cC 124 22 0.1134 0.0887 0.5000 9.8 2h5n-a1-m1-cD_2h5n-a1-m1-cC
26 5z5m-a1-m1-cD 272 42 0.1546 0.0551 0.3571 9.9 5z5m-a1-m1-cB_5z5m-a1-m1-cD, 5z5m-a1-m1-cC_5z5m-a1-m1-cD, 5z5m-a1-m1-cD_5z5m-a1-m1-cA
27 5z5m-a1-m1-cC 272 42 0.1546 0.0551 0.3571 9.9 5z5m-a1-m1-cC_5z5m-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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