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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
SFKDLNLTDAQKQQIREIMKGQRPLEERRAMHDIIASDTFDKVKAEAQIAKMEEQRKANM
LALMETQNKIYNILTPEQKKQFNANFEKRL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5wo3-a1-m1-cA 90 90 1.0000 1.0000 1.0000 1.35e-61 5wo3-a1-m1-cB_5wo3-a1-m1-cA
2 6bie-a2-m4-cA 97 96 0.9889 0.9175 0.9271 8.16e-58 6bie-a2-m1-cA_6bie-a2-m4-cA
3 6bie-a2-m1-cA 97 96 0.9889 0.9175 0.9271 8.16e-58 6bie-a2-m1-cA_6bie-a2-m4-cA
4 6bie-a1-m2-cB 97 96 0.9889 0.9175 0.9271 8.16e-58 6bie-a1-m1-cA_6bie-a1-m2-cB
5 6bie-a1-m1-cA 97 96 0.9889 0.9175 0.9271 8.16e-58 6bie-a1-m1-cA_6bie-a1-m2-cB
6 5wo3-a1-m1-cB 87 88 0.9667 1.0000 0.9886 4.24e-57 5wo3-a1-m1-cB_5wo3-a1-m1-cA
7 3itf-a1-m1-cB 103 91 0.2889 0.2524 0.2857 0.014 3itf-a1-m1-cA_3itf-a1-m1-cB
8 3itf-a1-m1-cA 103 91 0.2889 0.2524 0.2857 0.014 3itf-a1-m1-cA_3itf-a1-m1-cB
9 4gd9-a1-m1-cD 122 16 0.1111 0.0820 0.6250 3.1 4gd9-a1-m1-cD_4gd9-a1-m1-cB
10 2h5n-a2-m6-cA 132 22 0.1222 0.0833 0.5000 7.7 2h5n-a2-m1-cA_2h5n-a2-m6-cA, 2h5n-a2-m4-cB_2h5n-a2-m6-cA, 2h5n-a2-m5-cB_2h5n-a2-m6-cA, 2h5n-a2-m6-cC_2h5n-a2-m6-cA
11 2h5n-a2-m1-cA 132 22 0.1222 0.0833 0.5000 7.7 2h5n-a2-m1-cA_2h5n-a2-m6-cA
12 2hwj-a3-m5-cD 190 29 0.1556 0.0737 0.4828 7.7 2hwj-a3-m5-cD_2hwj-a3-m5-cA
13 2hwj-a3-m1-cD 190 29 0.1556 0.0737 0.4828 7.7 2hwj-a3-m1-cB_2hwj-a3-m1-cD
14 2hwj-a3-m4-cF 187 29 0.1556 0.0749 0.4828 7.7 2hwj-a3-m4-cE_2hwj-a3-m4-cF
15 2hwj-a3-m5-cA 193 29 0.1556 0.0725 0.4828 7.8 2hwj-a3-m5-cD_2hwj-a3-m5-cA
16 2hwj-a3-m5-cB 186 29 0.1556 0.0753 0.4828 7.9 2hwj-a3-m1-cB_2hwj-a3-m5-cB
17 2hwj-a3-m1-cB 186 29 0.1556 0.0753 0.4828 7.9 2hwj-a3-m1-cB_2hwj-a3-m1-cD, 2hwj-a3-m1-cB_2hwj-a3-m5-cB
18 2hwj-a3-m4-cE 185 29 0.1556 0.0757 0.4828 8.0 2hwj-a3-m4-cE_2hwj-a3-m4-cF
19 2h5n-a2-m6-cC 124 22 0.1222 0.0887 0.5000 8.5 2h5n-a2-m6-cC_2h5n-a2-m6-cA
20 2h5n-a1-m1-cC 124 22 0.1222 0.0887 0.5000 8.5 2h5n-a1-m1-cD_2h5n-a1-m1-cC
21 2h5n-a1-m1-cD 123 22 0.1222 0.0894 0.5000 8.9 2h5n-a1-m1-cD_2h5n-a1-m1-cC
22 8gxl-a1-m1-cB 122 86 0.2667 0.1967 0.2791 9.2 8gxl-a1-m1-cA_8gxl-a1-m1-cB
23 2h5n-a2-m5-cB 122 22 0.1222 0.0902 0.5000 9.4 2h5n-a2-m4-cB_2h5n-a2-m5-cB, 2h5n-a2-m5-cB_2h5n-a2-m6-cA
24 2h5n-a2-m4-cB 122 22 0.1222 0.0902 0.5000 9.4 2h5n-a2-m4-cB_2h5n-a2-m5-cB, 2h5n-a2-m4-cB_2h5n-a2-m6-cA

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Reference:
Jacob Schwartz et al.

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