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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
SFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRCTMERVKALETALKEAKEGAMRDR
KR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bjs-a1-m1-cA 69 62 1.0000 0.8986 1.0000 2.80e-39 7bjs-a1-m1-cB_7bjs-a1-m1-cA
2 7bjs-a1-m1-cB 62 62 1.0000 1.0000 1.0000 3.60e-39 7bjs-a1-m1-cB_7bjs-a1-m1-cA
3 7d2e-a1-m1-cC 59 25 0.1935 0.2034 0.4800 4.4 7d2e-a1-m1-cC_7d2e-a1-m1-cA, 7d2e-a1-m1-cC_7d2e-a1-m1-cD
4 7d2e-a1-m1-cA 62 25 0.1935 0.1935 0.4800 4.8 7d2e-a1-m1-cA_7d2e-a1-m1-cD, 7d2e-a1-m1-cC_7d2e-a1-m1-cA
5 7d2e-a1-m1-cD 63 25 0.1935 0.1905 0.4800 5.4 7d2e-a1-m1-cA_7d2e-a1-m1-cD, 7d2e-a1-m1-cC_7d2e-a1-m1-cD
6 6bwf-a1-m1-cD 766 20 0.1452 0.0117 0.4500 7.5 6bwf-a1-m1-cC_6bwf-a1-m1-cD
7 6bwf-a1-m1-cC 766 20 0.1452 0.0117 0.4500 7.5 6bwf-a1-m1-cC_6bwf-a1-m1-cD
8 5zx5-a1-m1-cD 814 20 0.1452 0.0111 0.4500 7.5 5zx5-a1-m1-cC_5zx5-a1-m1-cD
9 5zx5-a1-m1-cC 814 20 0.1452 0.0111 0.4500 7.5 5zx5-a1-m1-cC_5zx5-a1-m1-cD
10 1q1l-a1-m1-cB 330 34 0.2258 0.0424 0.4118 9.1 1q1l-a1-m1-cD_1q1l-a1-m1-cB
11 6sl0-a1-m1-cB 2638 22 0.1613 0.0038 0.4545 9.3 6sl0-a1-m1-cA_6sl0-a1-m1-cB
12 6sl0-a1-m1-cA 2638 22 0.1613 0.0038 0.4545 9.3 6sl0-a1-m1-cA_6sl0-a1-m1-cB
13 1xc4-a1-m2-cB 240 18 0.1774 0.0458 0.6111 9.3 1xc4-a1-m2-cA_1xc4-a1-m2-cB
14 1xc4-a1-m2-cA 240 18 0.1774 0.0458 0.6111 9.3 1xc4-a1-m1-cB_1xc4-a1-m2-cA, 1xc4-a1-m2-cA_1xc4-a1-m2-cB
15 1xc4-a1-m1-cB 240 18 0.1774 0.0458 0.6111 9.3 1xc4-a1-m1-cB_1xc4-a1-m2-cA
16 1wq5-a3-m2-cB 261 18 0.1774 0.0421 0.6111 9.4 1wq5-a3-m1-cA_1wq5-a3-m2-cB, 1wq5-a3-m2-cA_1wq5-a3-m2-cB
17 1q1l-a1-m1-cD 328 34 0.2258 0.0427 0.4118 9.7 1q1l-a1-m1-cC_1q1l-a1-m1-cD, 1q1l-a1-m1-cD_1q1l-a1-m1-cA, 1q1l-a1-m1-cD_1q1l-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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