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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
SFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENAR
SQISEKDAKINKLME

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pl5-a1-m1-cS 76 75 1.0000 0.9868 1.0000 2.35e-48 1pl5-a1-m1-cA_1pl5-a1-m1-cS
2 1pl5-a1-m1-cA 75 75 1.0000 1.0000 1.0000 2.38e-48 1pl5-a1-m1-cA_1pl5-a1-m1-cS
3 4gcz-a1-m1-cA 356 39 0.2400 0.0506 0.4615 3.0 4gcz-a1-m1-cA_4gcz-a1-m1-cB
4 8glv-a1-m1-cGt 4520 62 0.2533 0.0042 0.3065 3.1 8glv-a1-m1-cDb_8glv-a1-m1-cGt
5 8glv-a1-m1-cDb 4520 62 0.2533 0.0042 0.3065 3.1 8glv-a1-m1-cDb_8glv-a1-m1-cGt
6 4p3m-a1-m1-cB 389 44 0.1733 0.0334 0.2955 5.1 4p3m-a1-m1-cA_4p3m-a1-m1-cB
7 4p3m-a1-m1-cA 376 44 0.1733 0.0346 0.2955 6.2 4p3m-a1-m1-cA_4p3m-a1-m1-cB
8 3o0z-a2-m1-cD 157 64 0.2667 0.1274 0.3125 7.1 3o0z-a2-m1-cC_3o0z-a2-m1-cD
9 3o0z-a2-m1-cC 156 64 0.2667 0.1282 0.3125 7.3 3o0z-a2-m1-cC_3o0z-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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