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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
SGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDV
DQLEKVLPQLLLDF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ne1-a1-m1-cX 74 74 1.0000 1.0000 1.0000 2.39e-46 4ne1-a1-m1-cD_4ne1-a1-m1-cX
2 4ne1-a1-m1-cH 74 74 1.0000 1.0000 1.0000 2.39e-46 4ne1-a1-m1-cD_4ne1-a1-m1-cH
3 4ne1-a1-m1-cD 74 74 1.0000 1.0000 1.0000 2.39e-46 4ne1-a1-m1-cD_4ne1-a1-m1-cH, 4ne1-a1-m1-cD_4ne1-a1-m1-cX
4 4ndy-a4-m1-cX 74 74 1.0000 1.0000 1.0000 2.39e-46 4ndy-a4-m1-cB_4ndy-a4-m1-cX
5 4ndy-a4-m1-cB 74 74 1.0000 1.0000 1.0000 2.39e-46 4ndy-a4-m1-cB_4ndy-a4-m1-cX
6 7da1-a1-m1-cD 75 74 0.7027 0.6933 0.7027 1.46e-21 7da1-a1-m1-cC_7da1-a1-m1-cD
7 7da1-a1-m1-cC 75 74 0.7027 0.6933 0.7027 1.46e-21 7da1-a1-m1-cC_7da1-a1-m1-cD
8 4ap5-a1-m1-cB 389 42 0.1757 0.0334 0.3095 5.3 4ap5-a1-m1-cA_4ap5-a1-m1-cB
9 4ap5-a1-m1-cA 389 42 0.1757 0.0334 0.3095 5.3 4ap5-a1-m1-cA_4ap5-a1-m1-cB
10 3p6l-a2-m2-cA 258 25 0.1486 0.0426 0.4400 5.3 3p6l-a2-m1-cA_3p6l-a2-m2-cA
11 3p6l-a2-m1-cA 258 25 0.1486 0.0426 0.4400 5.3 3p6l-a2-m1-cA_3p6l-a2-m2-cA
12 7od9-a1-m1-cC 90 51 0.2162 0.1778 0.3137 7.8 7od9-a1-m1-cF_7od9-a1-m1-cC
13 1fpo-a7-m1-cB 171 46 0.2568 0.1111 0.4130 7.9 1fpo-a7-m2-cC_1fpo-a7-m1-cB
14 1fpo-a6-m4-cB 171 46 0.2568 0.1111 0.4130 7.9 1fpo-a6-m1-cA_1fpo-a6-m4-cB
15 1fpo-a6-m1-cA 171 46 0.2568 0.1111 0.4130 7.9 1fpo-a6-m1-cA_1fpo-a6-m4-cB
16 1fpo-a4-m2-cB 171 46 0.2568 0.1111 0.4130 7.9 1fpo-a4-m1-cA_1fpo-a4-m2-cB
17 1fpo-a4-m1-cA 171 46 0.2568 0.1111 0.4130 7.9 1fpo-a4-m1-cA_1fpo-a4-m2-cB, 1fpo-a4-m1-cC_1fpo-a4-m1-cA
18 1fpo-a7-m2-cC 157 46 0.2568 0.1210 0.4130 9.4 1fpo-a7-m2-cC_1fpo-a7-m1-cB
19 1fpo-a4-m1-cC 157 46 0.2568 0.1210 0.4130 9.4 1fpo-a4-m1-cC_1fpo-a4-m1-cA

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Reference:
Jacob Schwartz et al.

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