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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
SGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ifo-a1-m9-cA 46 46 1.0000 1.0000 1.0000 1.33e-24 2ifo-a1-m20-cA_2ifo-a1-m9-cA, 2ifo-a1-m3-cA_2ifo-a1-m9-cA
2 2ifo-a1-m3-cA 46 46 1.0000 1.0000 1.0000 1.33e-24 2ifo-a1-m3-cA_2ifo-a1-m9-cA
3 2ifo-a1-m20-cA 46 46 1.0000 1.0000 1.0000 1.33e-24 2ifo-a1-m20-cA_2ifo-a1-m9-cA
4 1my6-a1-m1-cB 198 19 0.2391 0.0556 0.5789 1.7 1my6-a1-m1-cA_1my6-a1-m1-cB
5 1my6-a1-m1-cA 198 19 0.2391 0.0556 0.5789 1.7 1my6-a1-m1-cA_1my6-a1-m1-cB
6 4s0f-a1-m1-cB 565 27 0.2391 0.0195 0.4074 2.1 4s0f-a1-m1-cA_4s0f-a1-m1-cB
7 4s0f-a1-m1-cA 565 27 0.2391 0.0195 0.4074 2.1 4s0f-a1-m1-cA_4s0f-a1-m1-cB
8 4ry2-a1-m1-cA 701 27 0.2391 0.0157 0.4074 2.7 4ry2-a1-m1-cB_4ry2-a1-m1-cA
9 4ry2-a1-m1-cB 699 27 0.2391 0.0157 0.4074 2.8 4ry2-a1-m1-cB_4ry2-a1-m1-cA
10 7kdp-a1-m1-cC 638 40 0.3478 0.0251 0.4000 3.8 7kdp-a1-m1-cB_7kdp-a1-m1-cC
11 7kdp-a1-m1-cB 638 40 0.3478 0.0251 0.4000 3.8 7kdp-a1-m1-cB_7kdp-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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