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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
SGGYFDAHALADYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2db7-a1-m1-cB 56 56 1.0000 1.0000 1.0000 1.14e-35 2db7-a1-m1-cA_2db7-a1-m1-cB
2 2db7-a1-m1-cA 56 56 1.0000 1.0000 1.0000 1.14e-35 2db7-a1-m1-cA_2db7-a1-m1-cB
3 7c4o-a1-m1-cB 48 50 0.3929 0.4583 0.4400 4.79e-08 7c4o-a1-m1-cA_7c4o-a1-m1-cB
4 7c4o-a1-m1-cA 48 50 0.3929 0.4583 0.4400 4.79e-08 7c4o-a1-m1-cA_7c4o-a1-m1-cB
5 2on5-a4-m1-cH 206 35 0.1786 0.0485 0.2857 1.9 2on5-a4-m1-cE_2on5-a4-m1-cH
6 2on5-a4-m1-cE 206 35 0.1786 0.0485 0.2857 1.9 2on5-a4-m1-cE_2on5-a4-m1-cH
7 6yca-a1-m1-cC 388 46 0.2143 0.0309 0.2609 1.9 6yca-a1-m1-cF_6yca-a1-m1-cC
8 6yca-a1-m1-cF 386 46 0.2143 0.0311 0.2609 2.0 6yca-a1-m1-cF_6yca-a1-m1-cC
9 6yca-a1-m1-cB 389 46 0.2143 0.0308 0.2609 2.0 6yca-a1-m1-cB_6yca-a1-m1-cA
10 6yca-a1-m1-cA 390 46 0.2143 0.0308 0.2609 2.1 6yca-a1-m1-cB_6yca-a1-m1-cA
11 6whj-a2-m1-cD 310 23 0.1786 0.0323 0.4348 5.5 6whj-a2-m1-cD_6whj-a2-m1-cC
12 1x1b-a2-m2-cA 337 37 0.2679 0.0445 0.4054 6.0 1x1b-a2-m1-cA_1x1b-a2-m2-cA
13 1x1b-a2-m1-cA 337 37 0.2679 0.0445 0.4054 6.0 1x1b-a2-m1-cA_1x1b-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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