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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
SGHTAHVDEAVKHAEEAVAHGKEGHTDQLLEHAKESLTHAKAASTHVGHGIKHLEDAIKH
GEEGHVGVATKHAQEAIEHLRAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3u8v-a3-m1-cB 83 83 1.0000 1.0000 1.0000 4.04e-50 3u8v-a3-m1-cA_3u8v-a3-m1-cB
2 3u8v-a3-m1-cA 83 83 1.0000 1.0000 1.0000 4.04e-50 3u8v-a3-m1-cA_3u8v-a3-m1-cB
3 4akf-a1-m2-cA 560 66 0.3012 0.0446 0.3788 0.91 4akf-a1-m1-cA_4akf-a1-m2-cA
4 4akf-a1-m1-cA 560 66 0.3012 0.0446 0.3788 0.91 4akf-a1-m1-cA_4akf-a1-m2-cA
5 4wjl-a1-m1-cB 719 48 0.2048 0.0236 0.3542 1.4 4wjl-a1-m1-cA_4wjl-a1-m1-cB
6 4wjl-a1-m1-cA 717 48 0.2048 0.0237 0.3542 1.4 4wjl-a1-m1-cA_4wjl-a1-m1-cB
7 8hdv-a1-m1-cB 129 27 0.1446 0.0930 0.4444 2.7 8hdv-a1-m1-cB_8hdv-a1-m1-cA
8 8hdv-a1-m1-cA 131 27 0.1446 0.0916 0.4444 3.0 8hdv-a1-m1-cB_8hdv-a1-m1-cA
9 3rrp-a1-m2-cB 460 55 0.2169 0.0391 0.3273 3.9 3rrp-a1-m1-cB_3rrp-a1-m2-cB, 3rrp-a1-m2-cB_3rrp-a1-m1-cA, 3rrp-a1-m2-cB_3rrp-a1-m2-cA
10 3rrp-a1-m1-cB 460 55 0.2169 0.0391 0.3273 3.9 3rrp-a1-m1-cB_3rrp-a1-m2-cB
11 3rrp-a1-m2-cA 465 55 0.2169 0.0387 0.3273 4.1 3rrp-a1-m2-cB_3rrp-a1-m2-cA
12 3rrp-a1-m1-cA 465 55 0.2169 0.0387 0.3273 4.1 3rrp-a1-m2-cB_3rrp-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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