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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
SGLVPRGSHELSVDGLPPNLTRSALLLALQPLGPGLQEARLLPSPGPAPGQIALLKFSSH
RAAAAKKALVEGQSHLCGEQVAVEWLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6le1-a1-m2-cA 87 87 1.0000 1.0000 1.0000 3.22e-56 6le1-a1-m1-cA_6le1-a1-m2-cA
2 6le1-a1-m1-cA 87 87 1.0000 1.0000 1.0000 3.22e-56 6le1-a1-m1-cA_6le1-a1-m2-cA
3 4jaw-a3-m1-cB 632 24 0.1724 0.0237 0.6250 0.17 4jaw-a3-m1-cB_4jaw-a3-m1-cA
4 4jaw-a3-m1-cA 633 24 0.1724 0.0237 0.6250 0.17 4jaw-a3-m1-cB_4jaw-a3-m1-cA
5 5yps-a3-m1-cF 199 36 0.1379 0.0603 0.3333 0.34 5yps-a3-m1-cF_5yps-a3-m1-cE
6 5yps-a3-m1-cE 200 36 0.1379 0.0600 0.3333 0.36 5yps-a3-m1-cF_5yps-a3-m1-cE
7 4f0q-a1-m1-cC 449 76 0.2759 0.0535 0.3158 1.5 4f0q-a1-m1-cC_4f0q-a1-m1-cB, 4f0q-a1-m1-cD_4f0q-a1-m1-cC
8 4f0q-a1-m1-cD 447 76 0.2759 0.0537 0.3158 1.5 4f0q-a1-m1-cD_4f0q-a1-m1-cB, 4f0q-a1-m1-cD_4f0q-a1-m1-cC
9 4f0q-a1-m1-cB 452 76 0.2759 0.0531 0.3158 1.5 4f0q-a1-m1-cA_4f0q-a1-m1-cB, 4f0q-a1-m1-cC_4f0q-a1-m1-cB, 4f0q-a1-m1-cD_4f0q-a1-m1-cB
10 4f0q-a1-m1-cA 452 76 0.2759 0.0531 0.3158 1.5 4f0q-a1-m1-cA_4f0q-a1-m1-cB
11 2rfr-a1-m3-cA 152 27 0.1149 0.0658 0.3704 2.7 2rfr-a1-m2-cA_2rfr-a1-m3-cA
12 2rfr-a1-m2-cA 152 27 0.1149 0.0658 0.3704 2.7 2rfr-a1-m2-cA_2rfr-a1-m3-cA
13 5ybq-a1-m1-cB 288 70 0.2529 0.0764 0.3143 3.2 5ybq-a1-m1-cB_5ybq-a1-m1-cA
14 2nr4-a1-m1-cB 182 42 0.1609 0.0769 0.3333 3.6 2nr4-a1-m1-cB_2nr4-a1-m1-cA
15 4zms-a1-m1-cA 207 32 0.1724 0.0725 0.4688 4.2 4zms-a1-m1-cB_4zms-a1-m1-cA
16 2yii-a1-m1-cB 649 25 0.1379 0.0185 0.4800 4.3 2yii-a1-m1-cD_2yii-a1-m1-cB
17 7mdh-a4-m3-cD 352 51 0.2299 0.0568 0.3922 5.7 7mdh-a4-m3-cC_7mdh-a4-m3-cD
18 7mdh-a4-m3-cC 352 51 0.2299 0.0568 0.3922 6.2 7mdh-a4-m1-cC_7mdh-a4-m3-cC, 7mdh-a4-m3-cC_7mdh-a4-m3-cD
19 7mdh-a4-m1-cC 352 51 0.2299 0.0568 0.3922 6.2 7mdh-a4-m1-cC_7mdh-a4-m3-cC
20 3a15-a2-m1-cD 362 26 0.1724 0.0414 0.5769 6.2 3a15-a2-m1-cC_3a15-a2-m1-cD
21 7t2f-a1-m1-cB 53 20 0.1264 0.2075 0.5500 8.0 7t2f-a1-m1-cA_7t2f-a1-m1-cB
22 7t2f-a1-m1-cA 53 20 0.1264 0.2075 0.5500 8.0 7t2f-a1-m1-cA_7t2f-a1-m1-cB
23 5zcm-a1-m2-cA 329 12 0.1034 0.0274 0.7500 8.3 5zcm-a1-m1-cA_5zcm-a1-m2-cA
24 5zcm-a1-m1-cA 329 12 0.1034 0.0274 0.7500 8.3 5zcm-a1-m1-cA_5zcm-a1-m2-cA
25 3zhc-a1-m1-cA 396 35 0.1264 0.0278 0.3143 8.5 3zhc-a1-m1-cA_3zhc-a1-m1-cB
26 3zhc-a1-m1-cB 407 35 0.1264 0.0270 0.3143 8.7 3zhc-a1-m1-cA_3zhc-a1-m1-cB
27 3exi-a1-m2-cA 332 15 0.1149 0.0301 0.6667 8.9 3exi-a1-m1-cA_3exi-a1-m2-cA
28 3exi-a1-m1-cA 332 15 0.1149 0.0301 0.6667 8.9 3exi-a1-m1-cA_3exi-a1-m2-cA
29 2jbw-a2-m1-cD 348 31 0.1609 0.0402 0.4516 9.5 2jbw-a2-m1-cC_2jbw-a2-m1-cD
30 2jbw-a2-m1-cC 341 31 0.1609 0.0411 0.4516 9.9 2jbw-a2-m1-cC_2jbw-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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