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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
SGNTGSIINNYYMQQYQNSMSTQLGTQNNDWFSKLASSAFTGLFGALLA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zba-a1-m9-c4 49 49 1.0000 1.0000 1.0000 1.89e-29 1zba-a1-m8-c4_1zba-a1-m9-c4
2 1zba-a1-m8-c4 49 49 1.0000 1.0000 1.0000 1.89e-29 1zba-a1-m8-c4_1zba-a1-m9-c4
3 7eo0-a1-m9-c4 44 49 0.8571 0.9545 0.8571 6.48e-22 7eo0-a1-m8-c4_7eo0-a1-m9-c4
4 7eo0-a1-m8-c4 44 49 0.8571 0.9545 0.8571 6.48e-22 7eo0-a1-m8-c4_7eo0-a1-m9-c4
5 2ws9-a1-m9-c4 21 21 0.2857 0.6667 0.6667 1.56e-04 2ws9-a1-m8-c4_2ws9-a1-m9-c4
6 2ws9-a1-m8-c4 21 21 0.2857 0.6667 0.6667 1.56e-04 2ws9-a1-m8-c4_2ws9-a1-m9-c4
7 1tmf-a1-m9-c4 31 20 0.2857 0.4516 0.7000 0.003 1tmf-a1-m8-c4_1tmf-a1-m9-c4
8 1tmf-a1-m8-c4 31 20 0.2857 0.4516 0.7000 0.003 1tmf-a1-m8-c4_1tmf-a1-m9-c4
9 2cz2-a1-m2-cA 207 32 0.2449 0.0580 0.3750 1.0 2cz2-a1-m1-cA_2cz2-a1-m2-cA
10 2cz2-a1-m1-cA 207 32 0.2449 0.0580 0.3750 1.0 2cz2-a1-m1-cA_2cz2-a1-m2-cA
11 1u7n-a1-m1-cA 305 35 0.1837 0.0295 0.2571 7.1 1u7n-a1-m1-cA_1u7n-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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