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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
SGPNYVHTNDGRSIVTDGKPQTDNDTGISYKDANGNKQQINRTDVKEVALENLEH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ra2-a7-m2-cB 55 55 1.0000 1.0000 1.0000 1.39e-35 2ra2-a7-m2-cF_2ra2-a7-m2-cB
2 2ra2-a7-m2-cF 50 50 0.9091 1.0000 1.0000 1.80e-31 2ra2-a7-m2-cF_2ra2-a7-m2-cB
3 3bdu-a1-m1-cE 51 46 0.5636 0.6078 0.6739 1.36e-15 3bdu-a1-m1-cA_3bdu-a1-m1-cE
4 3bdu-a1-m1-cA 51 46 0.5636 0.6078 0.6739 1.36e-15 3bdu-a1-m1-cA_3bdu-a1-m1-cE
5 2rd1-a5-m2-cB 56 52 0.4909 0.4821 0.5192 3.05e-13 2rd1-a5-m1-cB_2rd1-a5-m2-cB
6 2rd1-a5-m1-cB 56 52 0.4909 0.4821 0.5192 3.05e-13 2rd1-a5-m1-cB_2rd1-a5-m2-cB
7 2rb6-a3-m2-cB 52 52 0.3818 0.4038 0.4038 3.46e-05 2rb6-a3-m2-cB_2rb6-a3-m1-cA
8 2rb6-a3-m1-cA 53 52 0.3818 0.3962 0.4038 3.99e-05 2rb6-a3-m2-cB_2rb6-a3-m1-cA
9 1rqb-a1-m2-cA 448 50 0.3636 0.0446 0.4000 1.9 1rqb-a1-m1-cA_1rqb-a1-m2-cA
10 1rqb-a1-m1-cA 448 50 0.3636 0.0446 0.4000 1.9 1rqb-a1-m1-cA_1rqb-a1-m2-cA
11 7fb4-a1-m1-cC 1043 45 0.2364 0.0125 0.2889 4.5 7fb4-a1-m1-cA_7fb4-a1-m1-cC, 7fb4-a1-m1-cB_7fb4-a1-m1-cC
12 4wjl-a1-m1-cA 717 40 0.2364 0.0181 0.3250 6.7 4wjl-a1-m1-cA_4wjl-a1-m1-cB
13 4wjl-a1-m1-cB 719 40 0.2364 0.0181 0.3250 6.7 4wjl-a1-m1-cA_4wjl-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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