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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
SGSPLAQQIKNILSLISQADAAGRMDEVRTLQLNLCQLMVEYFQQGSPLAQQIKNIHSFG
HQAWAAGRLDEVLTIQENLYQLMKEYFQQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bww-a5-m1-cA 90 90 1.0000 1.0000 1.0000 8.06e-63 7bww-a5-m1-cD_7bww-a5-m1-cA
2 7bww-a5-m1-cD 88 89 0.9778 1.0000 0.9888 1.12e-59 7bww-a5-m1-cC_7bww-a5-m1-cD, 7bww-a5-m1-cD_7bww-a5-m1-cA
3 7bww-a5-m1-cC 86 87 0.9556 1.0000 0.9885 4.19e-58 7bww-a5-m1-cC_7bww-a5-m1-cD
4 7bww-a5-m1-cC 86 44 0.3667 0.3837 0.7500 5.98e-14 7bww-a5-m1-cC_7bww-a5-m1-cD
5 5od9-a1-m1-cA 95 94 0.7222 0.6842 0.6915 1.18e-36 5od9-a1-m1-cB_5od9-a1-m1-cA
6 5od9-a1-m1-cB 88 88 0.6889 0.7045 0.7045 1.72e-34 5od9-a1-m1-cB_5od9-a1-m1-cA
7 5od9-a1-m1-cB 88 44 0.3333 0.3409 0.6818 4.08e-13 5od9-a1-m1-cB_5od9-a1-m1-cA
8 3v1c-a1-m1-cB 47 45 0.4222 0.8085 0.8444 7.29e-22 3v1c-a1-m1-cA_3v1c-a1-m1-cB
9 3v1c-a1-m1-cB 47 45 0.4222 0.8085 0.8444 8.20e-20 3v1c-a1-m1-cA_3v1c-a1-m1-cB
10 3v1c-a1-m1-cA 46 45 0.4222 0.8261 0.8444 8.22e-22 3v1c-a1-m1-cA_3v1c-a1-m1-cB
11 3v1c-a1-m1-cA 46 44 0.4111 0.8043 0.8409 3.68e-19 3v1c-a1-m1-cA_3v1c-a1-m1-cB
12 3v1b-a1-m1-cA 46 45 0.4222 0.8261 0.8444 8.22e-22 3v1b-a1-m1-cA_3v1b-a1-m1-cB
13 3v1b-a1-m1-cA 46 44 0.4111 0.8043 0.8409 3.68e-19 3v1b-a1-m1-cA_3v1b-a1-m1-cB
14 3v1d-a4-m1-cH 48 45 0.4222 0.7917 0.8444 9.91e-22 3v1d-a4-m1-cE_3v1d-a4-m1-cH
15 3v1d-a4-m1-cH 48 45 0.4222 0.7917 0.8444 9.66e-20 3v1d-a4-m1-cE_3v1d-a4-m1-cH
16 3v1d-a4-m1-cE 48 45 0.4222 0.7917 0.8444 9.91e-22 3v1d-a4-m1-cE_3v1d-a4-m1-cH
17 3v1d-a4-m1-cE 48 45 0.4222 0.7917 0.8444 9.66e-20 3v1d-a4-m1-cE_3v1d-a4-m1-cH
18 3v1b-a1-m1-cB 48 45 0.4222 0.7917 0.8444 9.91e-22 3v1b-a1-m1-cA_3v1b-a1-m1-cB
19 3v1b-a1-m1-cB 48 45 0.4222 0.7917 0.8444 9.66e-20 3v1b-a1-m1-cA_3v1b-a1-m1-cB
20 3j6d-a1-m1-cv 148 43 0.1556 0.0946 0.3256 1.3 3j6d-a1-m1-cu_3j6d-a1-m1-cv
21 3j6d-a1-m1-cu 148 43 0.1556 0.0946 0.3256 1.3 3j6d-a1-m1-cu_3j6d-a1-m1-cv
22 6tgz-a1-m2-cF 352 74 0.1889 0.0483 0.2297 3.1 6tgz-a1-m1-cF_6tgz-a1-m2-cF
23 6tgz-a1-m1-cF 352 74 0.1889 0.0483 0.2297 3.1 6tgz-a1-m1-cF_6tgz-a1-m2-cF
24 3r2g-a2-m4-cA 323 30 0.1222 0.0341 0.3667 5.5 3r2g-a2-m2-cA_3r2g-a2-m4-cA
25 3r2g-a2-m2-cA 323 30 0.1222 0.0341 0.3667 5.5 3r2g-a2-m2-cA_3r2g-a2-m4-cA
26 1h94-a1-m2-cA 485 60 0.2000 0.0371 0.3000 7.2 1h94-a1-m1-cA_1h94-a1-m2-cA
27 1h94-a1-m1-cA 485 60 0.2000 0.0371 0.3000 7.2 1h94-a1-m1-cA_1h94-a1-m2-cA
28 4b6i-a2-m1-cB 100 28 0.1333 0.1200 0.4286 8.7 4b6i-a2-m1-cB_4b6i-a2-m1-cC
29 6uag-a1-m1-cA 94 64 0.1667 0.1596 0.2344 9.1 6uag-a1-m1-cB_6uag-a1-m1-cA
30 4b6i-a2-m1-cC 102 28 0.1333 0.1176 0.4286 9.9 4b6i-a2-m1-cB_4b6i-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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