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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
SGSSGAAFAKILDPAYQVDKGGRVRFVVELADPKLEVKWYKNGQEIRPSTKYIFEHKGCQ
RILFINNCQMTDDSEYYVTAGDEKCSTELFVR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yxm-a1-m2-cA 92 92 1.0000 1.0000 1.0000 1.21e-66 2yxm-a1-m1-cA_2yxm-a1-m2-cA
2 2yxm-a1-m1-cA 92 92 1.0000 1.0000 1.0000 1.21e-66 2yxm-a1-m1-cA_2yxm-a1-m2-cA
3 1waa-a1-m1-cD 93 88 0.2609 0.2581 0.2727 1.01e-05 1waa-a1-m1-cA_1waa-a1-m1-cD, 1waa-a1-m1-cC_1waa-a1-m1-cD
4 1waa-a1-m1-cC 93 88 0.2609 0.2581 0.2727 1.01e-05 1waa-a1-m1-cC_1waa-a1-m1-cD, 1waa-a1-m1-cC_1waa-a1-m1-cF
5 1waa-a1-m1-cA 92 88 0.2609 0.2609 0.2727 1.13e-05 1waa-a1-m1-cA_1waa-a1-m1-cD
6 1waa-a1-m1-cF 93 88 0.2609 0.2581 0.2727 1.87e-05 1waa-a1-m1-cC_1waa-a1-m1-cF
7 5jdj-a1-m1-cA 91 75 0.2391 0.2418 0.2933 0.002 5jdj-a1-m1-cL_5jdj-a1-m1-cA
8 5jdj-a1-m1-cL 90 75 0.2391 0.2444 0.2933 0.002 5jdj-a1-m1-cL_5jdj-a1-m1-cA
9 1koa-a1-m2-cA 447 55 0.1957 0.0403 0.3273 0.022 1koa-a1-m1-cA_1koa-a1-m2-cA
10 1koa-a1-m1-cA 447 55 0.1957 0.0403 0.3273 0.022 1koa-a1-m1-cA_1koa-a1-m2-cA
11 8edi-a1-m1-cB 200 50 0.1630 0.0750 0.3000 0.032 8edi-a1-m1-cA_8edi-a1-m1-cB
12 8edi-a1-m1-cA 200 50 0.1630 0.0750 0.3000 0.032 8edi-a1-m1-cA_8edi-a1-m1-cB
13 5k6x-a1-m1-cB 367 52 0.1630 0.0409 0.2885 0.048 5k6x-a1-m1-cB_5k6x-a1-m1-cA
14 5k6x-a1-m1-cA 374 52 0.1630 0.0401 0.2885 0.050 5k6x-a1-m1-cB_5k6x-a1-m1-cA
15 5k6w-a1-m1-cB 475 52 0.1739 0.0337 0.3077 0.088 5k6w-a1-m1-cA_5k6w-a1-m1-cB
16 5k6w-a1-m1-cA 475 52 0.1739 0.0337 0.3077 0.088 5k6w-a1-m1-cA_5k6w-a1-m1-cB
17 5k6z-a1-m1-cA 375 52 0.1630 0.0400 0.2885 0.12 5k6z-a1-m1-cA_5k6z-a1-m1-cB
18 5k6z-a1-m1-cB 378 52 0.1630 0.0397 0.2885 0.12 5k6z-a1-m1-cA_5k6z-a1-m1-cB
19 2j8h-a1-m4-cA 195 57 0.2391 0.1128 0.3860 0.43 2j8h-a1-m2-cA_2j8h-a1-m4-cA, 2j8h-a1-m3-cA_2j8h-a1-m4-cA
20 2j8h-a1-m3-cA 195 57 0.2391 0.1128 0.3860 0.43 2j8h-a1-m3-cA_2j8h-a1-m4-cA
21 2j8h-a1-m2-cA 195 57 0.2391 0.1128 0.3860 0.43 2j8h-a1-m2-cA_2j8h-a1-m4-cA
22 1u2h-a1-m2-cA 96 67 0.2174 0.2083 0.2985 2.6 1u2h-a1-m1-cA_1u2h-a1-m2-cA
23 1u2h-a1-m1-cA 96 67 0.2174 0.2083 0.2985 2.6 1u2h-a1-m1-cA_1u2h-a1-m2-cA
24 5gtw-a2-m1-cC 548 40 0.1630 0.0274 0.3750 2.6 5gtw-a2-m1-cB_5gtw-a2-m1-cC
25 5gtw-a2-m1-cB 548 40 0.1630 0.0274 0.3750 2.6 5gtw-a2-m1-cB_5gtw-a2-m1-cC
26 6hci-a1-m1-cD 97 90 0.2500 0.2371 0.2556 3.8 6hci-a1-m1-cA_6hci-a1-m1-cD, 6hci-a1-m1-cC_6hci-a1-m1-cD
27 6hci-a1-m1-cA 97 90 0.2500 0.2371 0.2556 3.8 6hci-a1-m1-cA_6hci-a1-m1-cD
28 6hci-a1-m1-cC 96 90 0.2500 0.2396 0.2556 3.8 6hci-a1-m1-cC_6hci-a1-m1-cD
29 2iep-a3-m4-cB 187 53 0.1522 0.0749 0.2642 4.6 2iep-a3-m1-cA_2iep-a3-m4-cB, 2iep-a3-m1-cB_2iep-a3-m4-cB, 2iep-a3-m4-cA_2iep-a3-m4-cB
30 2iep-a3-m1-cB 187 53 0.1522 0.0749 0.2642 4.6 2iep-a3-m1-cB_2iep-a3-m4-cB
31 2iep-a2-m1-cB 187 53 0.1522 0.0749 0.2642 4.6 2iep-a2-m1-cB_2iep-a2-m3-cA
32 7apz-a1-m2-cB 206 20 0.0978 0.0437 0.4500 4.8 7apz-a1-m1-cB_7apz-a1-m2-cB
33 7apz-a1-m1-cB 206 20 0.0978 0.0437 0.4500 4.8 7apz-a1-m1-cB_7apz-a1-m2-cB
34 2iep-a3-m4-cA 187 53 0.1522 0.0749 0.2642 4.8 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m4-cA_2iep-a3-m4-cB
35 2iep-a3-m1-cA 187 53 0.1522 0.0749 0.2642 4.8 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m1-cA_2iep-a3-m4-cB
36 2iep-a2-m3-cA 187 53 0.1522 0.0749 0.2642 4.8 2iep-a2-m1-cB_2iep-a2-m3-cA
37 5m2e-a2-m1-cD 418 32 0.1087 0.0239 0.3125 5.0 5m2e-a2-m1-cC_5m2e-a2-m1-cD
38 5m2e-a2-m1-cC 418 32 0.1087 0.0239 0.3125 5.0 5m2e-a2-m1-cC_5m2e-a2-m1-cD
39 4g6f-a1-m1-cD 211 47 0.1630 0.0711 0.3191 6.1 4g6f-a1-m1-cL_4g6f-a1-m1-cD
40 4g6f-a1-m1-cL 212 47 0.1630 0.0708 0.3191 6.3 4g6f-a1-m1-cL_4g6f-a1-m1-cD
41 3j6u-a1-m9-cE 493 25 0.0978 0.0183 0.3600 7.0 3j6u-a1-m24-cA_3j6u-a1-m9-cE, 3j6u-a1-m54-cE_3j6u-a1-m9-cE
42 3j6u-a1-m9-cC 493 25 0.0978 0.0183 0.3600 7.0 3j6u-a1-m9-cA_3j6u-a1-m9-cC
43 3j6u-a1-m9-cA 493 25 0.0978 0.0183 0.3600 7.0 3j6u-a1-m9-cA_3j6u-a1-m9-cC
44 3j6u-a1-m54-cE 493 25 0.0978 0.0183 0.3600 7.0 3j6u-a1-m54-cE_3j6u-a1-m9-cE
45 3j6u-a1-m24-cA 493 25 0.0978 0.0183 0.3600 7.0 3j6u-a1-m24-cA_3j6u-a1-m9-cE
46 3j6t-a1-m9-cC 493 25 0.0978 0.0183 0.3600 7.0 3j6t-a1-m55-cA_3j6t-a1-m9-cC, 3j6t-a1-m8-cC_3j6t-a1-m9-cC
47 3j6t-a1-m8-cC 493 25 0.0978 0.0183 0.3600 7.0 3j6t-a1-m8-cC_3j6t-a1-m9-cC
48 3j6t-a1-m55-cA 493 25 0.0978 0.0183 0.3600 7.0 3j6t-a1-m55-cA_3j6t-a1-m9-cC
49 6idi-a1-m9-cC 492 25 0.0978 0.0183 0.3600 7.1 6idi-a1-m9-cB_6idi-a1-m9-cC
50 6idi-a1-m9-cB 492 25 0.0978 0.0183 0.3600 7.1 6idi-a1-m9-cA_6idi-a1-m9-cB, 6idi-a1-m9-cB_6idi-a1-m9-cC
51 6idi-a1-m9-cA 492 25 0.0978 0.0183 0.3600 7.1 6idi-a1-m9-cA_6idi-a1-m9-cB
52 6vca-a1-m1-cL 212 83 0.2283 0.0991 0.2530 8.4 6vca-a1-m1-cF_6vca-a1-m1-cL
53 6vca-a1-m1-cF 212 83 0.2283 0.0991 0.2530 8.4 6vca-a1-m1-cF_6vca-a1-m1-cL
54 8odq-a1-m1-cB 407 28 0.1413 0.0319 0.4643 8.9 8odq-a1-m1-cB_8odq-a1-m1-cD
55 8odq-a1-m1-cD 410 28 0.1413 0.0317 0.4643 8.9 8odq-a1-m1-cB_8odq-a1-m1-cD
56 1f3j-a1-m1-cE 187 19 0.0870 0.0428 0.4211 9.5 1f3j-a1-m1-cE_1f3j-a1-m1-cB
57 1f3j-a1-m1-cB 187 19 0.0870 0.0428 0.4211 9.5 1f3j-a1-m1-cE_1f3j-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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