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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
SGVKGFVKDSITGSGLENATISVAGINHNITTGRFGDFYRLLVPGTYNLTVVLTGYMPLT
VTNVVVKEGPATEVDFSLRPHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5aq0-a1-m1-cB 82 82 1.0000 1.0000 1.0000 3.82e-55 5aq0-a1-m1-cA_5aq0-a1-m1-cB
2 5aq0-a1-m1-cA 81 81 0.9878 1.0000 1.0000 4.69e-54 5aq0-a1-m1-cA_5aq0-a1-m1-cB
3 1qmu-a1-m3-cA 380 77 0.4756 0.1026 0.5065 3.47e-16 1qmu-a1-m2-cA_1qmu-a1-m3-cA
4 1qmu-a1-m2-cA 380 77 0.4756 0.1026 0.5065 3.47e-16 1qmu-a1-m2-cA_1qmu-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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