Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
SHDCAKVDLENAELRRKLIRTKRAFEDTYEKLRMANKAKAQVEKDIKNQILKTHNVLRNV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5mw0-a1-m1-cA 62 60 1.0000 0.9677 1.0000 2.61e-38 5mw0-a1-m1-cB_5mw0-a1-m1-cA
2 5mw0-a1-m1-cB 60 60 1.0000 1.0000 1.0000 3.72e-38 5mw0-a1-m1-cB_5mw0-a1-m1-cA
3 5i7c-a2-m1-cC 59 59 0.9833 1.0000 1.0000 2.34e-37 5i7c-a2-m1-cD_5i7c-a2-m1-cC
4 5i7c-a2-m1-cD 58 58 0.9667 1.0000 1.0000 1.20e-36 5i7c-a2-m1-cD_5i7c-a2-m1-cC
5 8ovp-a1-m1-cB 496 43 0.2500 0.0302 0.3488 0.21 8ovp-a1-m1-cB_8ovp-a1-m1-cA
6 8ovp-a1-m1-cA 499 43 0.2500 0.0301 0.3488 0.22 8ovp-a1-m1-cB_8ovp-a1-m1-cA
7 3cgb-a1-m1-cB 431 56 0.2833 0.0394 0.3036 2.2 3cgb-a1-m1-cA_3cgb-a1-m1-cB
8 3cgb-a1-m1-cA 431 56 0.2833 0.0394 0.3036 2.2 3cgb-a1-m1-cA_3cgb-a1-m1-cB
9 7ung-a1-m1-cA2 391 29 0.1833 0.0281 0.3793 2.5 7ung-a1-m1-cA3_7ung-a1-m1-cA2
10 7ung-a1-m1-cA1 391 29 0.1833 0.0281 0.3793 2.5 7ung-a1-m1-cA0_7ung-a1-m1-cA1
11 7ung-a1-m1-cA3 333 29 0.1833 0.0330 0.3793 2.6 7ung-a1-m1-cA3_7ung-a1-m1-cA2
12 2qck-a2-m4-cA 155 52 0.2167 0.0839 0.2500 4.1 2qck-a2-m1-cA_2qck-a2-m4-cA, 2qck-a2-m3-cA_2qck-a2-m4-cA
13 2qck-a2-m3-cA 155 52 0.2167 0.0839 0.2500 4.1 2qck-a2-m3-cA_2qck-a2-m4-cA
14 2qck-a2-m1-cA 155 52 0.2167 0.0839 0.2500 4.1 2qck-a2-m1-cA_2qck-a2-m4-cA
15 8glv-a1-m1-cGt 4520 36 0.2333 0.0031 0.3889 5.0 8glv-a1-m1-cDb_8glv-a1-m1-cGt
16 8glv-a1-m1-cDb 4520 36 0.2333 0.0031 0.3889 5.0 8glv-a1-m1-cDb_8glv-a1-m1-cGt
17 7rro-a1-m1-cA1 396 28 0.1667 0.0253 0.3571 5.7 7rro-a1-m1-cA0_7rro-a1-m1-cA1
18 7rro-a1-m1-cA2 393 28 0.1667 0.0254 0.3571 5.8 7rro-a1-m1-cA3_7rro-a1-m1-cA2
19 7rro-a1-m1-cA3 334 28 0.1667 0.0299 0.3571 6.0 7rro-a1-m1-cA3_7rro-a1-m1-cA2
20 2zgd-a2-m2-cA 96 49 0.2833 0.1771 0.3469 8.7 2zgd-a2-m1-cA_2zgd-a2-m2-cA
21 2zgd-a2-m1-cA 96 49 0.2833 0.1771 0.3469 8.7 2zgd-a2-m1-cA_2zgd-a2-m2-cA
22 2a4a-a4-m1-cA 250 35 0.2333 0.0560 0.4000 8.8 2a4a-a4-m1-cB_2a4a-a4-m1-cA
23 2a4a-a3-m1-cA 250 35 0.2333 0.0560 0.4000 8.8 2a4a-a3-m2-cB_2a4a-a3-m1-cA
24 2a4a-a4-m1-cB 247 35 0.2333 0.0567 0.4000 9.1 2a4a-a4-m1-cB_2a4a-a4-m1-cA
25 2a4a-a3-m2-cB 247 35 0.2333 0.0567 0.4000 9.1 2a4a-a3-m2-cB_2a4a-a3-m1-cA
26 2qh9-a1-m1-cB 168 48 0.2500 0.0893 0.3125 9.7 2qh9-a1-m1-cB_2qh9-a1-m1-cA
27 2qh9-a1-m1-cA 172 48 0.2500 0.0872 0.3125 9.8 2qh9-a1-m1-cB_2qh9-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600