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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
SHKLQEVEIRNKDLEGQLSEEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLA
KLLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cve-a3-m1-cC 64 64 1.0000 1.0000 1.0000 1.72e-38 3cve-a3-m1-cD_3cve-a3-m1-cC
2 3cve-a1-m1-cB 64 64 1.0000 1.0000 1.0000 1.72e-38 3cve-a1-m1-cD_3cve-a1-m1-cB
3 3cve-a1-m1-cA 66 64 1.0000 0.9697 1.0000 2.42e-38 3cve-a1-m1-cD_3cve-a1-m1-cA
4 3cve-a3-m1-cD 60 60 0.9375 1.0000 1.0000 2.91e-35 3cve-a3-m1-cD_3cve-a3-m1-cC
5 3cve-a1-m1-cD 60 60 0.9375 1.0000 1.0000 2.91e-35 3cve-a1-m1-cD_3cve-a1-m1-cA, 3cve-a1-m1-cD_3cve-a1-m1-cB
6 3cvf-a3-m1-cB 69 62 0.4062 0.3768 0.4194 1.28e-05 3cvf-a3-m1-cA_3cvf-a3-m1-cB
7 3cvf-a3-m1-cA 69 62 0.4062 0.3768 0.4194 1.28e-05 3cvf-a3-m1-cA_3cvf-a3-m1-cB
8 3cvf-a1-m1-cB 69 62 0.4062 0.3768 0.4194 1.28e-05 3cvf-a1-m1-cB_3cvf-a1-m1-cD
9 3cvf-a1-m1-cA 69 62 0.4062 0.3768 0.4194 1.28e-05 3cvf-a1-m1-cA_3cvf-a1-m1-cD
10 3cvf-a1-m1-cD 71 63 0.4062 0.3662 0.4127 1.37e-05 3cvf-a1-m1-cA_3cvf-a1-m1-cD, 3cvf-a1-m1-cB_3cvf-a1-m1-cD
11 2ym9-a5-m1-cC 216 62 0.3125 0.0926 0.3226 2.0 2ym9-a5-m1-cD_2ym9-a5-m1-cC
12 7rye-a1-m1-cX 212 62 0.3125 0.0943 0.3226 2.0 7rye-a1-m1-cV_7rye-a1-m1-cX
13 7rye-a1-m1-cV 212 62 0.3125 0.0943 0.3226 2.0 7rye-a1-m1-cV_7rye-a1-m1-cX
14 7rye-a1-m1-cR 212 62 0.3125 0.0943 0.3226 2.0 7rye-a1-m1-cF_7rye-a1-m1-cR
15 7rye-a1-m1-cF 212 62 0.3125 0.0943 0.3226 2.0 7rye-a1-m1-cF_7rye-a1-m1-cR
16 3jbh-a1-m8-cG 962 46 0.3125 0.0208 0.4348 2.9 3jbh-a1-m8-cG_3jbh-a1-m8-cH
17 3jbh-a1-m8-cH 964 46 0.3125 0.0207 0.4348 2.9 3jbh-a1-m8-cG_3jbh-a1-m8-cH
18 2p7n-a1-m2-cA 327 41 0.2500 0.0489 0.3902 6.2 2p7n-a1-m1-cA_2p7n-a1-m2-cA
19 2p7n-a1-m1-cA 327 41 0.2500 0.0489 0.3902 6.2 2p7n-a1-m1-cA_2p7n-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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