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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
SHMASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2a26-a3-m2-cC 46 46 1.0000 1.0000 1.0000 9.98e-26 2a26-a3-m1-cB_2a26-a3-m2-cC, 2a26-a3-m1-cC_2a26-a3-m2-cC, 2a26-a3-m2-cB_2a26-a3-m2-cC
2 2a26-a3-m2-cB 46 46 1.0000 1.0000 1.0000 9.98e-26 2a26-a3-m2-cB_2a26-a3-m2-cC
3 2a26-a3-m1-cC 46 46 1.0000 1.0000 1.0000 9.98e-26 2a26-a3-m1-cC_2a26-a3-m2-cC
4 2a26-a3-m1-cB 46 46 1.0000 1.0000 1.0000 9.98e-26 2a26-a3-m1-cB_2a26-a3-m2-cC
5 2ix5-a1-m1-cD 415 22 0.2174 0.0241 0.4545 5.1 2ix5-a1-m1-cA_2ix5-a1-m1-cD, 2ix5-a1-m1-cB_2ix5-a1-m1-cD, 2ix5-a1-m1-cC_2ix5-a1-m1-cD
6 2ix5-a1-m1-cC 415 22 0.2174 0.0241 0.4545 5.1 2ix5-a1-m1-cC_2ix5-a1-m1-cD
7 2ix5-a1-m1-cB 415 22 0.2174 0.0241 0.4545 5.1 2ix5-a1-m1-cB_2ix5-a1-m1-cD
8 2ix5-a1-m1-cA 415 22 0.2174 0.0241 0.4545 5.1 2ix5-a1-m1-cA_2ix5-a1-m1-cD
9 3vtf-a1-m2-cA 432 28 0.1957 0.0208 0.3214 9.4 3vtf-a1-m1-cA_3vtf-a1-m2-cA
10 3vtf-a1-m1-cA 432 28 0.1957 0.0208 0.3214 9.4 3vtf-a1-m1-cA_3vtf-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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