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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
SHMFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETVDCCGSSTLAALTTSV
LKNNLCPSGSNIISNLLKKDCHQKIDDFFSGKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3x0g-a1-m2-cA 93 93 1.0000 1.0000 1.0000 5.11e-64 3x0g-a1-m1-cA_3x0g-a1-m2-cA
2 3x0g-a1-m1-cA 93 93 1.0000 1.0000 1.0000 5.11e-64 3x0g-a1-m1-cA_3x0g-a1-m2-cA
3 5dfw-a1-m2-cA 90 89 0.9032 0.9333 0.9438 2.07e-57 5dfw-a1-m1-cA_5dfw-a1-m2-cA
4 5dfw-a1-m1-cA 90 89 0.9032 0.9333 0.9438 2.07e-57 5dfw-a1-m1-cA_5dfw-a1-m2-cA
5 5m3d-a2-m1-cB 91 89 0.9032 0.9231 0.9438 2.30e-57 5m3d-a2-m1-cC_5m3d-a2-m1-cB
6 5m3d-a2-m1-cC 89 88 0.8925 0.9326 0.9432 1.50e-56 5m3d-a2-m1-cC_5m3d-a2-m1-cB
7 6rlr-a1-m1-cB 79 84 0.2151 0.2532 0.2381 0.005 6rlr-a1-m1-cB_6rlr-a1-m1-cA
8 6rlr-a1-m1-cD 80 84 0.2151 0.2500 0.2381 0.005 6rlr-a1-m1-cA_6rlr-a1-m1-cD
9 6rlr-a1-m1-cA 80 84 0.2151 0.2500 0.2381 0.005 6rlr-a1-m1-cA_6rlr-a1-m1-cD, 6rlr-a1-m1-cB_6rlr-a1-m1-cA
10 5a8w-a2-m1-cK 442 62 0.2258 0.0475 0.3387 2.5 5a8w-a2-m1-cH_5a8w-a2-m1-cK
11 5a8w-a2-m1-cH 442 62 0.2258 0.0475 0.3387 2.5 5a8w-a2-m1-cH_5a8w-a2-m1-cK
12 5cjp-a1-m1-cF 372 80 0.2151 0.0538 0.2500 7.9 5cjp-a1-m1-cE_5cjp-a1-m1-cF
13 5cjp-a1-m1-cE 372 80 0.2151 0.0538 0.2500 7.9 5cjp-a1-m1-cE_5cjp-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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