Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
SHMNIITVTLNMEKYNFLGISIVGQSGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNF
ENMSNDDAVRVLRDIVHKPGPIVLTVAKSGGGWKWYGWF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cbx-a1-m1-cB 99 99 1.0000 1.0000 1.0000 3.23e-69 3cbx-a1-m1-cB_3cbx-a1-m1-cA
2 3cbx-a1-m1-cA 105 104 1.0000 0.9429 0.9519 1.64e-66 3cbx-a1-m1-cB_3cbx-a1-m1-cA
3 3cby-a1-m1-cA 101 99 0.9697 0.9505 0.9697 7.38e-64 3cby-a1-m1-cB_3cby-a1-m1-cA
4 3cc0-a1-m1-cA 106 102 0.9293 0.8679 0.9020 3.29e-59 3cc0-a1-m1-cC_3cc0-a1-m1-cA
5 3cby-a1-m1-cB 98 97 0.9293 0.9388 0.9485 1.34e-58 3cby-a1-m1-cB_3cby-a1-m1-cA
6 2rey-a1-m2-cA 91 87 0.8485 0.9231 0.9655 1.09e-54 2rey-a1-m1-cA_2rey-a1-m2-cA
7 2rey-a1-m1-cA 91 87 0.8485 0.9231 0.9655 1.09e-54 2rey-a1-m1-cA_2rey-a1-m2-cA
8 3cc0-a1-m1-cB 103 100 0.8990 0.8641 0.8900 1.18e-52 3cc0-a1-m1-cC_3cc0-a1-m1-cB
9 3cc0-a1-m1-cC 98 97 0.8586 0.8673 0.8763 5.45e-49 3cc0-a1-m1-cC_3cc0-a1-m1-cA, 3cc0-a1-m1-cC_3cc0-a1-m1-cB
10 2f0a-a5-m1-cC 80 84 0.7879 0.9750 0.9286 2.67e-44 2f0a-a5-m1-cC_2f0a-a5-m1-cA
11 2f0a-a5-m1-cA 87 89 0.7980 0.9080 0.8876 1.35e-42 2f0a-a5-m1-cC_2f0a-a5-m1-cA
12 1l6o-a1-m1-cC 87 89 0.7980 0.9080 0.8876 1.35e-42 1l6o-a1-m1-cC_1l6o-a1-m1-cA
13 1l6o-a1-m1-cA 90 89 0.7980 0.8778 0.8876 1.40e-42 1l6o-a1-m1-cB_1l6o-a1-m1-cA, 1l6o-a1-m1-cC_1l6o-a1-m1-cA
14 1l6o-a1-m1-cB 88 89 0.7980 0.8977 0.8876 1.69e-42 1l6o-a1-m1-cB_1l6o-a1-m1-cA
15 3fy5-a2-m2-cB 80 84 0.7778 0.9625 0.9167 2.82e-42 3fy5-a2-m1-cB_3fy5-a2-m2-cB
16 3fy5-a2-m1-cB 80 84 0.7778 0.9625 0.9167 2.82e-42 3fy5-a2-m1-cB_3fy5-a2-m2-cB
17 3axa-a2-m3-cB 97 100 0.3838 0.3918 0.3800 3.66e-12 3axa-a2-m1-cB_3axa-a2-m3-cB
18 3axa-a2-m1-cB 97 100 0.3838 0.3918 0.3800 3.66e-12 3axa-a2-m1-cB_3axa-a2-m3-cB
19 4q2n-a3-m1-cE 97 97 0.3838 0.3918 0.3918 3.91e-12 4q2n-a3-m1-cE_4q2n-a3-m1-cF
20 4q2n-a3-m1-cF 98 98 0.3838 0.3878 0.3878 5.72e-12 4q2n-a3-m1-cE_4q2n-a3-m1-cF
21 7qcr-a1-m1-cB 86 90 0.3535 0.4070 0.3889 2.81e-11 7qcr-a1-m1-cB_7qcr-a1-m1-cA
22 7qcr-a1-m1-cA 87 90 0.3535 0.4023 0.3889 4.44e-11 7qcr-a1-m1-cB_7qcr-a1-m1-cA
23 3lny-a1-m6-cA 94 71 0.2828 0.2979 0.3944 1.23e-09 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
24 3lny-a1-m5-cA 94 71 0.2828 0.2979 0.3944 1.23e-09 3lny-a1-m5-cA_3lny-a1-m6-cA
25 3lny-a1-m3-cA 94 71 0.2828 0.2979 0.3944 1.23e-09 3lny-a1-m3-cA_3lny-a1-m6-cA
26 7mfw-a2-m2-cB 98 82 0.3333 0.3367 0.4024 1.29e-09 7mfw-a2-m1-cA_7mfw-a2-m2-cB
27 7mfw-a1-m1-cB 98 82 0.3333 0.3367 0.4024 1.29e-09 7mfw-a1-m1-cA_7mfw-a1-m1-cB
28 7mfw-a2-m1-cA 93 81 0.3232 0.3441 0.3951 5.17e-09 7mfw-a2-m1-cA_7mfw-a2-m2-cB
29 7mfw-a1-m1-cA 93 81 0.3232 0.3441 0.3951 5.17e-09 7mfw-a1-m1-cA_7mfw-a1-m1-cB
30 4amh-a1-m1-cB 92 85 0.3131 0.3370 0.3647 5.82e-09 4amh-a1-m1-cB_4amh-a1-m1-cA
31 4amh-a1-m1-cA 94 85 0.3131 0.3298 0.3647 6.77e-09 4amh-a1-m1-cB_4amh-a1-m1-cA
32 6nek-a1-m2-cA 86 86 0.3030 0.3488 0.3488 2.09e-08 6nek-a1-m1-cA_6nek-a1-m2-cA
33 6nek-a1-m1-cA 86 86 0.3030 0.3488 0.3488 2.09e-08 6nek-a1-m1-cA_6nek-a1-m2-cA
34 2xkx-a1-m1-cB 718 87 0.3131 0.0432 0.3563 6.36e-08 2xkx-a1-m1-cB_2xkx-a1-m1-cA
35 2xkx-a1-m1-cB 718 52 0.1818 0.0251 0.3462 5.50e-05 2xkx-a1-m1-cB_2xkx-a1-m1-cA
36 2xkx-a1-m1-cB 718 59 0.2121 0.0292 0.3559 6.95e-05 2xkx-a1-m1-cB_2xkx-a1-m1-cA
37 2xkx-a1-m1-cA 721 87 0.3131 0.0430 0.3563 6.36e-08 2xkx-a1-m1-cB_2xkx-a1-m1-cA
38 2xkx-a1-m1-cA 721 52 0.1818 0.0250 0.3462 5.50e-05 2xkx-a1-m1-cB_2xkx-a1-m1-cA
39 2xkx-a1-m1-cA 721 59 0.2121 0.0291 0.3559 6.95e-05 2xkx-a1-m1-cB_2xkx-a1-m1-cA
40 3rl8-a1-m1-cD 94 65 0.2424 0.2553 0.3692 1.13e-07 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
41 3rl8-a1-m1-cA 94 65 0.2424 0.2553 0.3692 1.13e-07 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
42 3rl8-a1-m1-cC 95 65 0.2424 0.2526 0.3692 1.18e-07 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
43 3rl8-a1-m1-cE 90 65 0.2424 0.2667 0.3692 1.29e-07 3rl8-a1-m1-cE_3rl8-a1-m1-cD
44 3rl8-a1-m1-cB 90 65 0.2424 0.2667 0.3692 1.29e-07 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
45 2x7z-a1-m2-cA 99 65 0.2424 0.2424 0.3692 1.57e-07 2x7z-a1-m1-cA_2x7z-a1-m2-cA
46 2x7z-a1-m1-cA 99 65 0.2424 0.2424 0.3692 1.57e-07 2x7z-a1-m1-cA_2x7z-a1-m2-cA
47 4h11-a3-m2-cA 102 52 0.2020 0.1961 0.3846 3.02e-07 4h11-a3-m1-cB_4h11-a3-m2-cA
48 4h11-a3-m1-cB 102 52 0.2020 0.1961 0.3846 3.02e-07 4h11-a3-m1-cB_4h11-a3-m2-cA
49 2wl7-a1-m3-cA 96 52 0.2020 0.2083 0.3846 3.09e-07 2wl7-a1-m2-cA_2wl7-a1-m3-cA
50 2wl7-a1-m2-cA 96 52 0.2020 0.2083 0.3846 3.09e-07 2wl7-a1-m2-cA_2wl7-a1-m3-cA
51 2fne-a4-m1-cB 100 62 0.2222 0.2200 0.3548 6.01e-07 2fne-a4-m1-cB_2fne-a4-m2-cC
52 2fne-a4-m2-cC 104 62 0.2222 0.2115 0.3548 6.84e-07 2fne-a4-m1-cB_2fne-a4-m2-cC
53 5glj-a1-m1-cD 96 91 0.2727 0.2812 0.2967 9.09e-07 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
54 5glj-a1-m1-cA 96 91 0.2727 0.2812 0.2967 9.09e-07 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
55 3zrt-a1-m1-cA 197 65 0.2525 0.1269 0.3846 1.03e-06 3zrt-a1-m1-cC_3zrt-a1-m1-cA
56 3zrt-a1-m1-cA 197 52 0.1818 0.0914 0.3462 1.35e-04 3zrt-a1-m1-cC_3zrt-a1-m1-cA
57 5glj-a1-m1-cB 93 91 0.2727 0.2903 0.2967 1.03e-06 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
58 3zrt-a1-m1-cC 188 65 0.2525 0.1330 0.3846 1.28e-06 3zrt-a1-m1-cC_3zrt-a1-m1-cA
59 3zrt-a1-m1-cC 188 52 0.1818 0.0957 0.3462 1.61e-04 3zrt-a1-m1-cC_3zrt-a1-m1-cA
60 2iwq-a1-m2-cA 92 74 0.2424 0.2609 0.3243 3.79e-06 2iwq-a1-m1-cA_2iwq-a1-m2-cA
61 2iwq-a1-m1-cA 92 74 0.2424 0.2609 0.3243 3.79e-06 2iwq-a1-m1-cA_2iwq-a1-m2-cA
62 3b76-a1-m1-cA 101 45 0.1818 0.1782 0.4000 1.29e-05 3b76-a1-m1-cA_3b76-a1-m1-cB
63 3b76-a1-m1-cB 102 45 0.1818 0.1765 0.4000 1.44e-05 3b76-a1-m1-cA_3b76-a1-m1-cB
64 2i1n-a4-m3-cB 102 65 0.2323 0.2255 0.3538 8.42e-05 2i1n-a4-m1-cA_2i1n-a4-m3-cB, 2i1n-a4-m1-cB_2i1n-a4-m3-cB, 2i1n-a4-m3-cA_2i1n-a4-m3-cB
65 2i1n-a4-m1-cB 102 65 0.2323 0.2255 0.3538 8.42e-05 2i1n-a4-m1-cB_2i1n-a4-m3-cB
66 2i1n-a3-m2-cB 102 65 0.2323 0.2255 0.3538 8.42e-05 2i1n-a3-m1-cA_2i1n-a3-m2-cB
67 2i1n-a4-m3-cA 101 65 0.2323 0.2277 0.3538 8.73e-05 2i1n-a4-m3-cA_2i1n-a4-m3-cB
68 2i1n-a4-m1-cA 101 65 0.2323 0.2277 0.3538 8.73e-05 2i1n-a4-m1-cA_2i1n-a4-m3-cB
69 2i1n-a3-m1-cA 101 65 0.2323 0.2277 0.3538 8.73e-05 2i1n-a3-m1-cA_2i1n-a3-m2-cB
70 4q2q-a1-m2-cA 90 70 0.2121 0.2333 0.3000 2.36e-04 4q2q-a1-m1-cA_4q2q-a1-m2-cA
71 4q2q-a1-m1-cA 90 70 0.2121 0.2333 0.3000 2.36e-04 4q2q-a1-m1-cA_4q2q-a1-m2-cA
72 5jxb-a1-m1-cA 117 59 0.2121 0.1795 0.3559 4.16e-04 5jxb-a1-m1-cA_5jxb-a1-m1-cC
73 5jxb-a1-m1-cC 119 59 0.2121 0.1765 0.3559 4.36e-04 5jxb-a1-m1-cA_5jxb-a1-m1-cC
74 8ah6-a1-m1-cA 101 59 0.2121 0.2079 0.3559 5.81e-04 8ah6-a1-m1-cA_8ah6-a1-m1-cB
75 8ah6-a1-m1-cB 102 59 0.2121 0.2059 0.3559 6.03e-04 8ah6-a1-m1-cA_8ah6-a1-m1-cB
76 3tsw-a5-m1-cB 194 52 0.1717 0.0876 0.3269 6.59e-04 3tsw-a5-m1-cB_3tsw-a5-m1-cD
77 3tsw-a5-m1-cD 199 52 0.1717 0.0854 0.3269 7.26e-04 3tsw-a5-m1-cB_3tsw-a5-m1-cD
78 1tp5-a2-m2-cA 115 59 0.2121 0.1826 0.3559 8.40e-04 1tp5-a2-m1-cA_1tp5-a2-m2-cA
79 1tp5-a2-m1-cA 115 59 0.2121 0.1826 0.3559 8.40e-04 1tp5-a2-m1-cA_1tp5-a2-m2-cA
80 7qrt-a1-m1-cB 91 64 0.2121 0.2308 0.3281 0.001 7qrt-a1-m1-cB_7qrt-a1-m1-cA
81 7qrt-a1-m1-cA 92 64 0.2121 0.2283 0.3281 0.002 7qrt-a1-m1-cB_7qrt-a1-m1-cA
82 3e17-a1-m1-cB 79 56 0.1717 0.2152 0.3036 0.003 3e17-a1-m1-cB_3e17-a1-m1-cA
83 2rcz-a1-m1-cA 79 40 0.1616 0.2025 0.4000 0.004 2rcz-a1-m1-cA_2rcz-a1-m1-cB
84 3e17-a1-m1-cA 80 56 0.1717 0.2125 0.3036 0.004 3e17-a1-m1-cB_3e17-a1-m1-cA
85 2rcz-a1-m1-cB 81 40 0.1616 0.1975 0.4000 0.005 2rcz-a1-m1-cA_2rcz-a1-m1-cB
86 1n7f-a1-m1-cB 86 72 0.2222 0.2558 0.3056 0.023 1n7f-a1-m1-cA_1n7f-a1-m1-cB
87 1n7f-a1-m1-cA 86 72 0.2222 0.2558 0.3056 0.023 1n7f-a1-m1-cA_1n7f-a1-m1-cB
88 7m4r-a1-m1-cA 360 58 0.1515 0.0417 0.2586 0.026 7m4r-a1-m1-cB_7m4r-a1-m1-cA
89 2i04-a1-m1-cB 85 47 0.1414 0.1647 0.2979 0.050 2i04-a1-m1-cA_2i04-a1-m1-cB
90 2i04-a1-m1-cA 85 47 0.1414 0.1647 0.2979 0.050 2i04-a1-m1-cA_2i04-a1-m1-cB
91 6bjo-a1-m1-cB 85 70 0.1818 0.2118 0.2571 0.095 6bjo-a1-m1-cB_6bjo-a1-m1-cA
92 2iwp-a1-m1-cB 106 78 0.2121 0.1981 0.2692 0.11 2iwp-a1-m1-cA_2iwp-a1-m1-cB
93 6bjo-a1-m1-cA 86 71 0.1818 0.2093 0.2535 0.13 6bjo-a1-m1-cB_6bjo-a1-m1-cA
94 7qcs-a1-m1-cB 98 58 0.1515 0.1531 0.2586 0.18 7qcs-a1-m1-cA_7qcs-a1-m1-cB
95 3o46-a1-m3-cA 83 48 0.1616 0.1928 0.3333 0.18 3o46-a1-m2-cA_3o46-a1-m3-cA
96 3o46-a1-m2-cA 83 48 0.1616 0.1928 0.3333 0.18 3o46-a1-m2-cA_3o46-a1-m3-cA
97 7qcs-a1-m1-cA 97 58 0.1515 0.1546 0.2586 0.18 7qcs-a1-m1-cA_7qcs-a1-m1-cB
98 3hpk-a3-m1-cA 112 71 0.1818 0.1607 0.2535 0.18 3hpk-a3-m1-cB_3hpk-a3-m1-cA
99 2iwp-a1-m1-cA 92 72 0.2121 0.2283 0.2917 0.19 2iwp-a1-m1-cA_2iwp-a1-m1-cB
100 3hpk-a3-m1-cB 107 71 0.1818 0.1682 0.2535 0.20 3hpk-a3-m1-cB_3hpk-a3-m1-cA
101 3qdo-a1-m2-cA 109 62 0.1818 0.1651 0.2903 0.31 3qdo-a1-m1-cA_3qdo-a1-m2-cA
102 3qdo-a1-m1-cA 109 62 0.1818 0.1651 0.2903 0.31 3qdo-a1-m1-cA_3qdo-a1-m2-cA
103 3qe1-a1-m2-cA 102 44 0.1313 0.1275 0.2955 0.50 3qe1-a1-m1-cA_3qe1-a1-m2-cA
104 3qe1-a1-m1-cA 102 44 0.1313 0.1275 0.2955 0.50 3qe1-a1-m1-cA_3qe1-a1-m2-cA
105 1pdr-a1-m6-cA 96 46 0.1616 0.1667 0.3478 0.62 1pdr-a1-m2-cA_1pdr-a1-m6-cA, 1pdr-a1-m3-cA_1pdr-a1-m6-cA, 1pdr-a1-m5-cA_1pdr-a1-m6-cA
106 1pdr-a1-m5-cA 96 46 0.1616 0.1667 0.3478 0.62 1pdr-a1-m5-cA_1pdr-a1-m6-cA
107 1pdr-a1-m3-cA 96 46 0.1616 0.1667 0.3478 0.62 1pdr-a1-m3-cA_1pdr-a1-m6-cA
108 1pdr-a1-m2-cA 96 46 0.1616 0.1667 0.3478 0.62 1pdr-a1-m2-cA_1pdr-a1-m6-cA
109 1kwa-a5-m2-cB 86 45 0.1111 0.1279 0.2444 0.76 1kwa-a5-m2-cB_1kwa-a5-m1-cA
110 1kwa-a4-m1-cB 86 45 0.1111 0.1279 0.2444 0.76 1kwa-a4-m1-cB_1kwa-a4-m1-cA
111 1kwa-a5-m1-cA 88 45 0.1111 0.1250 0.2444 0.94 1kwa-a5-m2-cB_1kwa-a5-m1-cA
112 1kwa-a4-m1-cA 88 45 0.1111 0.1250 0.2444 0.94 1kwa-a4-m1-cB_1kwa-a4-m1-cA
113 6y38-a1-m1-cA 91 44 0.1111 0.1209 0.2500 1.4 6y38-a1-m1-cA_6y38-a1-m1-cB
114 6y38-a1-m1-cB 92 44 0.1111 0.1196 0.2500 1.4 6y38-a1-m1-cA_6y38-a1-m1-cB
115 4q2p-a1-m1-cA 98 96 0.2626 0.2653 0.2708 2.1 4q2p-a1-m1-cB_4q2p-a1-m1-cA, 4q2p-a1-m1-cC_4q2p-a1-m1-cA
116 3dj1-a3-m6-cB 110 45 0.1414 0.1273 0.3111 5.2 3dj1-a3-m5-cB_3dj1-a3-m6-cB, 3dj1-a3-m6-cB_3dj1-a3-m1-cA
117 3dj1-a3-m5-cB 110 45 0.1414 0.1273 0.3111 5.2 3dj1-a3-m5-cB_3dj1-a3-m6-cB
118 4oaa-a1-m1-cB 391 34 0.1616 0.0409 0.4706 5.3 4oaa-a1-m1-cA_4oaa-a1-m1-cB
119 4oaa-a1-m1-cA 391 34 0.1616 0.0409 0.4706 5.3 4oaa-a1-m1-cA_4oaa-a1-m1-cB
120 5ocs-a3-m3-cD 371 61 0.1717 0.0458 0.2787 5.8 5ocs-a3-m1-cC_5ocs-a3-m3-cD
121 3dj1-a3-m1-cA 115 45 0.1414 0.1217 0.3111 6.1 3dj1-a3-m6-cB_3dj1-a3-m1-cA
122 5ocs-a3-m1-cC 369 61 0.1717 0.0461 0.2787 6.5 5ocs-a3-m1-cC_5ocs-a3-m3-cD
123 5dmy-a1-m1-cC 855 76 0.2121 0.0246 0.2763 7.1 5dmy-a1-m1-cA_5dmy-a1-m1-cC, 5dmy-a1-m1-cC_5dmy-a1-m1-cB
124 5dmy-a1-m1-cA 855 76 0.2121 0.0246 0.2763 7.1 5dmy-a1-m1-cA_5dmy-a1-m1-cB, 5dmy-a1-m1-cA_5dmy-a1-m1-cC
125 5dmy-a1-m1-cB 858 76 0.2121 0.0245 0.2763 7.4 5dmy-a1-m1-cA_5dmy-a1-m1-cB, 5dmy-a1-m1-cC_5dmy-a1-m1-cB
126 5tyt-a2-m2-cD 89 46 0.1212 0.1348 0.2609 9.9 5tyt-a2-m1-cC_5tyt-a2-m2-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600