Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
SHMSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMSECYFYSKFGECSNKECPFLHIDP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2rhk-a3-m1-cD 60 60 1.0000 1.0000 1.0000 7.74e-41 2rhk-a3-m1-cD_2rhk-a3-m1-cC
2 2rhk-a2-m2-cD 60 60 1.0000 1.0000 1.0000 7.74e-41 2rhk-a2-m2-cD_2rhk-a2-m1-cC
3 2rhk-a3-m1-cC 63 60 1.0000 0.9524 1.0000 1.08e-40 2rhk-a3-m1-cD_2rhk-a3-m1-cC
4 2rhk-a2-m1-cC 63 60 1.0000 0.9524 1.0000 1.08e-40 2rhk-a2-m2-cD_2rhk-a2-m1-cC
5 1d2e-a1-m1-cD 397 26 0.2333 0.0353 0.5385 0.016 1d2e-a1-m1-cA_1d2e-a1-m1-cD
6 1d2e-a1-m1-cC 397 26 0.2333 0.0353 0.5385 0.016 1d2e-a1-m1-cA_1d2e-a1-m1-cC
7 1d2e-a1-m1-cA 397 26 0.2333 0.0353 0.5385 0.016 1d2e-a1-m1-cA_1d2e-a1-m1-cC, 1d2e-a1-m1-cA_1d2e-a1-m1-cD
8 4cs7-a1-m1-cC 172 21 0.1667 0.0581 0.4762 0.23 4cs7-a1-m1-cE_4cs7-a1-m1-cC
9 4cs7-a1-m1-cE 168 21 0.1667 0.0595 0.4762 0.25 4cs7-a1-m1-cB_4cs7-a1-m1-cE, 4cs7-a1-m1-cE_4cs7-a1-m1-cC
10 4cs7-a1-m1-cB 166 21 0.1667 0.0602 0.4762 0.25 4cs7-a1-m1-cB_4cs7-a1-m1-cE
11 4csa-a1-m1-cC 164 21 0.1667 0.0610 0.4762 0.25 4csa-a1-m1-cB_4csa-a1-m1-cC
12 4cs8-a1-m1-cB 164 21 0.1667 0.0610 0.4762 0.25 4cs8-a1-m1-cA_4cs8-a1-m1-cB
13 4cs8-a1-m1-cA 159 21 0.1667 0.0629 0.4762 0.26 4cs8-a1-m1-cA_4cs8-a1-m1-cB, 4cs8-a1-m1-cA_4cs8-a1-m1-cC
14 4csa-a1-m1-cB 159 21 0.1667 0.0629 0.4762 0.26 4csa-a1-m1-cB_4csa-a1-m1-cC
15 4cs8-a1-m1-cC 162 21 0.1667 0.0617 0.4762 0.26 4cs8-a1-m1-cA_4cs8-a1-m1-cC
16 4lj0-a1-m1-cB 64 46 0.2333 0.2188 0.3043 0.91 4lj0-a1-m1-cB_4lj0-a1-m1-cA
17 4lj0-a1-m1-cA 65 46 0.2333 0.2154 0.3043 0.96 4lj0-a1-m1-cB_4lj0-a1-m1-cA
18 7yxm-a1-m1-cD 392 23 0.1833 0.0281 0.4783 1.1 7yxm-a1-m1-cB_7yxm-a1-m1-cD
19 7yxm-a1-m1-cB 392 23 0.1833 0.0281 0.4783 1.1 7yxm-a1-m1-cB_7yxm-a1-m1-cD
20 5vn6-a1-m1-cB 268 30 0.1833 0.0410 0.3667 2.0 5vn6-a1-m1-cB_5vn6-a1-m1-cA
21 6jx7-a1-m1-cC 1245 38 0.1833 0.0088 0.2895 2.1 6jx7-a1-m1-cB_6jx7-a1-m1-cC
22 6jx7-a1-m1-cB 1245 38 0.1833 0.0088 0.2895 2.1 6jx7-a1-m1-cB_6jx7-a1-m1-cC
23 4c3b-a4-m1-cF 178 21 0.1667 0.0562 0.4762 4.7 4c3b-a4-m1-cE_4c3b-a4-m1-cF
24 1lbq-a1-m1-cB 354 28 0.1667 0.0282 0.3571 4.7 1lbq-a1-m1-cB_1lbq-a1-m1-cA
25 1lbq-a1-m1-cA 356 28 0.1667 0.0281 0.3571 4.7 1lbq-a1-m1-cB_1lbq-a1-m1-cA
26 4c3b-a4-m1-cE 174 21 0.1667 0.0575 0.4762 4.9 4c3b-a4-m1-cE_4c3b-a4-m1-cF
27 7bbn-a1-m1-cA 361 35 0.2167 0.0360 0.3714 4.9 7bbn-a1-m1-cA_7bbn-a1-m1-cB
28 7bbn-a1-m1-cB 366 35 0.2167 0.0355 0.3714 4.9 7bbn-a1-m1-cA_7bbn-a1-m1-cB
29 7lg9-a1-m1-cA 272 17 0.1333 0.0294 0.4706 8.1 7lg9-a1-m1-cB_7lg9-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600