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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
SHMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA
KGPSAANVTAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i2z-a1-m1-cA 71 71 1.0000 1.0000 1.0000 1.25e-47 3i2z-a1-m1-cB_3i2z-a1-m1-cA
2 3i2z-a1-m1-cB 67 67 0.9437 1.0000 1.0000 3.64e-44 3i2z-a1-m1-cB_3i2z-a1-m1-cA
3 2i5m-a2-m2-cX 66 64 0.6197 0.6667 0.6875 4.64e-25 2i5m-a2-m1-cX_2i5m-a2-m2-cX
4 2i5m-a2-m1-cX 66 64 0.6197 0.6667 0.6875 4.64e-25 2i5m-a2-m1-cX_2i5m-a2-m2-cX
5 2hax-a1-m1-cB 66 65 0.6056 0.6515 0.6615 2.81e-24 2hax-a1-m1-cA_2hax-a1-m1-cB
6 2hax-a1-m1-cA 66 65 0.6056 0.6515 0.6615 2.81e-24 2hax-a1-m1-cA_2hax-a1-m1-cB
7 1c9o-a1-m1-cB 66 65 0.6056 0.6515 0.6615 2.81e-24 1c9o-a1-m1-cA_1c9o-a1-m1-cB
8 1c9o-a1-m1-cA 66 65 0.6056 0.6515 0.6615 2.81e-24 1c9o-a1-m1-cA_1c9o-a1-m1-cB
9 3cam-a1-m1-cB 65 63 0.5775 0.6308 0.6508 3.48e-24 3cam-a1-m1-cA_3cam-a1-m1-cB
10 3cam-a1-m1-cA 65 63 0.5775 0.6308 0.6508 3.48e-24 3cam-a1-m1-cA_3cam-a1-m1-cB
11 1hzb-a1-m1-cB 66 63 0.5915 0.6364 0.6667 1.39e-23 1hzb-a1-m1-cA_1hzb-a1-m1-cB
12 1hzb-a1-m1-cA 66 63 0.5915 0.6364 0.6667 1.39e-23 1hzb-a1-m1-cA_1hzb-a1-m1-cB
13 5jx4-a1-m1-cA 65 70 0.6338 0.6923 0.6429 6.96e-23 5jx4-a1-m1-cA_5jx4-a1-m1-cB
14 5jx4-a1-m1-cB 66 70 0.6338 0.6818 0.6429 8.51e-23 5jx4-a1-m1-cA_5jx4-a1-m1-cB
15 7f3i-a1-m1-cA 93 70 0.4366 0.3333 0.4429 4.31e-15 7f3i-a1-m1-cE_7f3i-a1-m1-cA
16 7f3i-a1-m1-cE 91 70 0.4366 0.3407 0.4429 4.43e-15 7f3i-a1-m1-cE_7f3i-a1-m1-cA
17 2bh8-a1-m2-cB 86 54 0.4507 0.3721 0.5926 8.70e-14 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
18 2bh8-a1-m1-cB 86 54 0.4507 0.3721 0.5926 8.70e-14 2bh8-a1-m1-cB_2bh8-a1-m2-cB
19 2bh8-a1-m2-cA 85 33 0.3803 0.3176 0.8182 1.09e-13 2bh8-a1-m2-cA_2bh8-a1-m2-cB
20 2bh8-a1-m1-cA 85 33 0.3803 0.3176 0.8182 1.09e-13 2bh8-a1-m1-cA_2bh8-a1-m2-cB
21 4alp-a1-m4-cD 84 70 0.4085 0.3452 0.4143 2.93e-11 4alp-a1-m4-cD_4alp-a1-m2-cB
22 3ulj-a3-m2-cA 87 70 0.4085 0.3333 0.4143 3.29e-11 3ulj-a3-m2-cA_3ulj-a3-m2-cB
23 3ulj-a3-m1-cA 87 70 0.4085 0.3333 0.4143 3.29e-11 3ulj-a3-m1-cA_3ulj-a3-m2-cB
24 4alp-a1-m2-cB 86 70 0.4085 0.3372 0.4143 3.47e-11 4alp-a1-m4-cD_4alp-a1-m2-cB
25 3ulj-a3-m2-cB 89 70 0.4085 0.3258 0.4143 1.40e-09 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB
26 3aqq-a1-m1-cD 98 52 0.3099 0.2245 0.4231 4.83e-08 3aqq-a1-m1-cC_3aqq-a1-m1-cD, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
27 3aqq-a1-m1-cB 99 52 0.3099 0.2222 0.4231 5.43e-08 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
28 3aqq-a1-m1-cC 97 52 0.3099 0.2268 0.4231 6.62e-08 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cC_3aqq-a1-m1-cD
29 1m1j-a1-m1-cF 389 57 0.2254 0.0411 0.2807 1.2 1m1j-a1-m1-cF_1m1j-a1-m1-cC
30 1m1j-a1-m1-cC 390 57 0.2254 0.0410 0.2807 1.3 1m1j-a1-m1-cF_1m1j-a1-m1-cC
31 2cb1-a1-m4-cA 404 27 0.1831 0.0322 0.4815 1.9 2cb1-a1-m1-cA_2cb1-a1-m4-cA, 2cb1-a1-m2-cA_2cb1-a1-m4-cA, 2cb1-a1-m3-cA_2cb1-a1-m4-cA
32 2cb1-a1-m3-cA 404 27 0.1831 0.0322 0.4815 1.9 2cb1-a1-m3-cA_2cb1-a1-m4-cA
33 2cb1-a1-m2-cA 404 27 0.1831 0.0322 0.4815 1.9 2cb1-a1-m2-cA_2cb1-a1-m4-cA
34 2cb1-a1-m1-cA 404 27 0.1831 0.0322 0.4815 1.9 2cb1-a1-m1-cA_2cb1-a1-m4-cA
35 7bzv-a1-m2-cB 490 24 0.1690 0.0245 0.5000 2.3 7bzv-a1-m1-cA_7bzv-a1-m2-cB, 7bzv-a1-m1-cB_7bzv-a1-m2-cB, 7bzv-a1-m2-cA_7bzv-a1-m2-cB
36 7bzv-a1-m1-cB 490 24 0.1690 0.0245 0.5000 2.3 7bzv-a1-m1-cB_7bzv-a1-m2-cB
37 7bzv-a1-m2-cA 489 24 0.1690 0.0245 0.5000 2.4 7bzv-a1-m2-cA_7bzv-a1-m2-cB
38 7bzv-a1-m1-cA 489 24 0.1690 0.0245 0.5000 2.4 7bzv-a1-m1-cA_7bzv-a1-m2-cB
39 2o6x-a1-m2-cA 306 30 0.1690 0.0392 0.4000 3.1 2o6x-a1-m1-cA_2o6x-a1-m2-cA
40 2o6x-a1-m1-cA 306 30 0.1690 0.0392 0.4000 3.1 2o6x-a1-m1-cA_2o6x-a1-m2-cA
41 8h2i-a1-m5-cbG 504 24 0.1549 0.0218 0.4583 7.5 8h2i-a1-m4-cbG_8h2i-a1-m5-cbG
42 8h2i-a1-m4-cbG 504 24 0.1549 0.0218 0.4583 7.5 8h2i-a1-m4-cbG_8h2i-a1-m5-cbG
43 4iib-a1-m1-cB 832 30 0.1268 0.0108 0.3000 8.2 4iib-a1-m1-cB_4iib-a1-m1-cA
44 4iib-a1-m1-cA 834 30 0.1268 0.0108 0.3000 8.3 4iib-a1-m1-cB_4iib-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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