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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
SHMSLIRGVVVSKQLVYDPTGTKYVKIDVVEEKEKITVPRITLWLTEEEEEVFGDIDVGD
VIEINIENGAITIKPES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ly5-a1-m2-cA 77 77 1.0000 1.0000 1.0000 1.10e-49 5ly5-a1-m1-cA_5ly5-a1-m2-cA
2 5ly5-a1-m1-cA 77 77 1.0000 1.0000 1.0000 1.10e-49 5ly5-a1-m1-cA_5ly5-a1-m2-cA
3 7b4q-a1-m1-cB 314 37 0.1948 0.0478 0.4054 0.18 7b4q-a1-m1-cA_7b4q-a1-m1-cB
4 7b4q-a1-m1-cA 314 37 0.1948 0.0478 0.4054 0.18 7b4q-a1-m1-cA_7b4q-a1-m1-cB
5 5n76-a2-m1-cC 63 20 0.1039 0.1270 0.4000 5.2 5n76-a2-m1-cB_5n76-a2-m1-cC
6 5n76-a2-m1-cB 63 20 0.1039 0.1270 0.4000 5.2 5n76-a2-m1-cB_5n76-a2-m1-cC
7 1q3q-a3-m4-cD 518 65 0.2468 0.0367 0.2923 5.3 1q3q-a3-m4-cC_1q3q-a3-m4-cD
8 1q3q-a3-m4-cC 518 65 0.2468 0.0367 0.2923 5.3 1q3q-a3-m4-cC_1q3q-a3-m4-cD
9 1q3q-a1-m4-cD 518 65 0.2468 0.0367 0.2923 5.3 1q3q-a1-m4-cB_1q3q-a1-m4-cD
10 1q3q-a1-m4-cB 518 65 0.2468 0.0367 0.2923 5.3 1q3q-a1-m4-cB_1q3q-a1-m4-cD

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Reference:
Jacob Schwartz et al.

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